Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1983 ATGGGAAAGATAAATTACTTTGCCTACATTATTATTCAATCTTGGTATCTCATGGTCATAATTACAGTTGCTGAGTTTGAAAGTGTTGACTCTTCTGTTCAACCACTCCTAGGAGGAAAGAAATTGATCATTGGGATACCCTTGAAAACTGGTTTCACTGAATTCGTGGAAGCCAAGCTGGATCCTACAACACTCCAATTGGTCCACGTCAGTGGCTACTCCATTGATATCTTTTCTGCCACGGTTGACTATATCAAACGCTACTCCCATTTCAATGTCTCTTACGAGTTTCGGCCATTCATCAAAAATGGAACAGGACAAAGTGCTGGCTCTTATGACAAACTTGTTCAACAGGTTTCTAAACACCAGTATGATGCGGTGGTGGGAGACGTATCAATTGTAGCTGAGAGAACAAGGTATGTGGATTTCACGTTACCATATGCAGAGTCAGGTGTGAGGATGCTGGTGCGAGTTGGATATGGCGGCCGCGGTATAAACATGTGGATATTTCTGCGGCCATTTAGTTGGGATCTATGGTTGTCCATCATTCTAGTCTGTGCTTTTATAGGAGCTGCAATACGATTCATGGAACGTCGTAACATTCATAATAATAATAATAGTCATGAAGAAGAATCTGCACAAGGCTCTCCACCTCCCCAACAACTCAAAGGGATATCAATATTATGGCTTCCAATTGATCAACTCTTCCTTCCTCAGAGAGAATCAGTAGGCAAGAATTGCTCCAAGTTTGTATTGGTGGTATGGTTGATATTGGGATTTGTGTTGATGCAAAGCTACACGGCAAACTTGTCATCTATGTTGACCGTGGACCAATTGCAGCAAAACTATCCAAGTGTTGATGATTTGAGAACAAATGGTGACAACATAGGGTACCCAACGGATTCCTATCTATCTGAGGTGCTGGTTGACAAATTCAAGTTTGATAAATCAAGGCTAAAGAATCTGACAAAAATGGAAGATTATCAGAAAGCTTTAGACAAAGGAACTCCAAAAGGCGGCGTTGATGTTATATTTGAGGAGATACCATACATCAAGATGTTCCTCAAAAAATATGGTTCCAAGTATAACATGGTTGGGCCTCACTATCGTACTGATGGGCTTGGCTTTGCGTTTCCAATTAACTCCAACTTAACATCTTACTTTTCAAGAGCTATATTGAACGTTACCCAGAATGATAGTTTTATGCAACCGATTGAGATGAAGTATTTTGGAAGCAGTAACTATGATTTCGAAGATGATTCTTATGATCAATTATCAACGTCAACATCATCAGATGGTACTCCTAGCCTTAACTCTCAGAGTTTTGCGGGCTTGTTCATCATCACAGGAATTGCCACATTTTTAGCTTTGGTGGTTTCTGAAAGCAACATCTGGAGAAAACCCGTAACACTAGCCAAAGTCTACAGTCAAAAGTTTCTTCTAATGTCTCCTAGTTGGGCAAAATCTAAGCAATCTATGGATGTTTCTACAAAGCAAGGGAATAAAATATGTTCTATCAGTGAACCAAATAGCATTCCTGAAAGTCCATCAAGGTTTCCAAAGTCTAATCTTGCTCTAGACACAGTTGTATAG 1593 0.3992 MGKINYFAYIIIQSWYLMVIITVAEFESVDSSVQPLLGGKKLIIGIPLKTGFTEFVEAKLDPTTLQLVHVSGYSIDIFSATVDYIKRYSHFNVSYEFRPFIKNGTGQSAGSYDKLVQQVSKHQYDAVVGDVSIVAERTRYVDFTLPYAESGVRMLVRVGYGGRGINMWIFLRPFSWDLWLSIILVCAFIGAAIRFMERRNIHNNNNSHEEESAQGSPPPQQLKGISILWLPIDQLFLPQRESVGKNCSKFVLVVWLILGFVLMQSYTANLSSMLTVDQLQQNYPSVDDLRTNGDNIGYPTDSYLSEVLVDKFKFDKSRLKNLTKMEDYQKALDKGTPKGGVDVIFEEIPYIKMFLKKYGSKYNMVGPHYRTDGLGFAFPINSNLTSYFSRAILNVTQNDSFMQPIEMKYFGSSNYDFEDDSYDQLSTSTSSDGTPSLNSQSFAGLFIITGIATFLALVVSESNIWRKPVTLAKVYSQKFLLMSPSWAKSKQSMDVSTKQGNKICSISEPNSIPESPSRFPKSNLALDTVV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1983 530 SUPERFAMILY Periplasmic binding protein-like II 17 412 - -
Ahy1g1983 530 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 12 486 - -
Ahy1g1983 530 Pfam Ligand-gated ion channel 412 452 IPR001320 GO:0015276|GO:0016020
Ahy1g1983 530 Gene3D - 36 160 - -
Ahy1g1983 530 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 486 - -
Ahy1g1983 530 MobiDBLite consensus disorder prediction 507 530 - -
Ahy1g1983 530 CDD GluR_Plant 40 410 - -
Ahy1g1983 530 Pfam Bacterial extracellular solute-binding proteins, family 3 99 411 IPR001638 -
Ahy1g1983 530 Gene3D - 165 318 - -
Ahy1g1983 530 MobiDBLite consensus disorder prediction 507 522 - -
Ahy1g1983 530 SMART GluR_14 41 412 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1983 Ahy-Chr1 96661027 96663237 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1983 39 459 Ion Channels AT5G11210 36.105 1.67e-74 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1983 K05387 - aip:107641909 998.808