Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1979 ATGGGATCCTCCCTGAGTTGCTGTGGCTCTGACAAAATTGAAGAAGCAGCGCAAACAGCATTTGGTGCAGTTAACAATTCATGGAGAATATTCACGTACAAGGAGCTGCATGCAGCTACGAATGGATTCAGTGAGGACAATAAGCTTGGTGAAGGTGGATTTGGAAGCGTGTATTGGGGAAAAACAAGTGATGGTCATGAGATAGCGGTGAAGAAACTGAAGGCAATGAACTCGAAGGCAGAGATGGAATTTGCGGTAGAAGTAGAAGTACTGGGAAGGGTTAGGCACAAGAATTTGTTGGGACTGAGAGGGTACTGTGCAGGGAATGAAGAAAGGCTTATAGTGTACGATTACATGGCGAATCTGAGCCTTCTTTCTCATCTGCATGGGCAGTTTGCAAATGAAGTGCAACTGGATTGGAAAAGGAGAATGAAGATTGCAATTGGATCTGCAGAAGGAGTGTTGTATTTGCACCATGACGTCACACCACACATCATCCACAGAGACATCAAAGCAAGCAACGTTCTTCTCAACTCAGACTTCGAGCCGCTTGTTGCTGACTTCGGCTTCGCTAAGCTGATCCCTGAAGGGGTTAGCCACATGACTACCCGTGTTAAGGGCACTTTGGGATACTTGGCACCCGAATACGCCATGTGGGGAAAAGTCTCCGAGAGTTGCGATGTTTATAGCTTTGGGATTCTTCTCTTGGAGCTTGTAACTGGAAGAAAGCCAATTGAGAAGCTCCCTGGTGGGATTAAGAGAACCATAACCGAATGGGCTGAGCCATTCATAAGTAAATCAAGGTTCGGGGATCTTGTTGATCCTAAACTCAGAGGTAACTTTGATGAGAATCAGGTGAAGCAAGCCATTCATGTGGCTGCACTTTGCGTGCAGAGTGAGCCTGATAAGAGACCCAACATGAAGCAAGTGGTTAACCTTCTCAAAGGGTATGAACCCAATCATAACACTGTTTTGAACACTAGGCTTCACACTGTCAAATACACTGATACATTGATGCCACTTGATCATCATGGTGATGATGATCTTGATGATGATGCAACTAATAGCAGCGCCGGCTATGGTGTTTTTAGTGCCATTCAGGTCCAAAAGATGAACTTACCACCATAA 1128 0.453 MGSSLSCCGSDKIEEAAQTAFGAVNNSWRIFTYKELHAATNGFSEDNKLGEGGFGSVYWGKTSDGHEIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGNEERLIVYDYMANLSLLSHLHGQFANEVQLDWKRRMKIAIGSAEGVLYLHHDVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLELVTGRKPIEKLPGGIKRTITEWAEPFISKSRFGDLVDPKLRGNFDENQVKQAIHVAALCVQSEPDKRPNMKQVVNLLKGYEPNHNTVLNTRLHTVKYTDTLMPLDHHGDDDLDDDATNSSAGYGVFSAIQVQKMNLPP* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1979 375 Gene3D Transferase(Phosphotransferase) domain 1 119 336 - -
Ahy1g1979 375 SMART serkin_6 43 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1979 375 PANTHER OS01G0750732 PROTEIN 1 372 - -
Ahy1g1979 375 SUPERFAMILY Protein kinase-like (PK-like) 26 327 IPR011009 -
Ahy1g1979 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Ahy1g1979 375 Gene3D Phosphorylase Kinase; domain 1 5 118 - -
Ahy1g1979 375 ProSiteProfiles Protein kinase domain profile. 43 324 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1979 375 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 372 - -
Ahy1g1979 375 CDD STKc_IRAK 49 316 - -
Ahy1g1979 375 Pfam Protein kinase domain 44 312 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1979 375 ProSitePatterns Protein kinases ATP-binding region signature. 49 72 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1979 Ahy-Chr1 96585954 96588027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1979 6 333 Trihelix Transcription Factor Family AT5G38560 44.477 1.79e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Ahy1g1979 Pkinase 1.90E-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1979 - - ahf:112698754 748.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g2999 11 147606236 147608093 Ahy1g1979 1 96585954 96588027 hybridization