Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1978 ATGGTGCTTGCTTACCCTTCTAAGGTGCTAGTTGGACTCTCTTTGGACTCAGATGACAGCAAGGAGCTTCTCTCATGGGCAATAAGAGTCCTTGCCAATCCAAATGACAGCATTGTGGCAGTGCATGTTCTTGTTACTGAGGATAAGAAGAAGCGCGCCTCGGTCAGAAAGAGGCAATCACAACTAAGGCAGGCAAAGGCTCATGTTATATCTATGCTTGGAGAATTTGCACAAACATGTTGGTCTAAGCAGGTTAATCTGGAGGCAAGAGTGGCATTCAGTTCCACAGTAGGTGGAGGTTTAGCTGAGGAAGCCAAGTCCATCAATGCCGATTTTCTTCTTCTACGTGGCTCAAGAAATCCAAAAAACAAGAATGGAAGTTCCAAGGGAATTAGCAAGTATTGCTTTGAGCATGCACATGAAGGCTGCACTGTGGTCTCGGTTGGGAAATTCGCCAAGGCAGAGCAAGGCTCCAGTTCAAATCCGAAGCATTCTCAAGATGATAGTGAAGCAAGTTCTAAATGGTTATCTAAGGATGATGACAATCAAGGTGACACGGCTGCTACCTTCCCTGTTCTGAATGAATTCATGTCTGACTCTGAGTCTAAAGAACAGAACAGTTCGCCAAGAACAGTACTAGATGCGCTGGAAGGGCAATCTAACAGCACAGAAGATGATACATTCAGCACTATGGTCTCAAGCACCTGCACCACAGATACACCTAAGAGAAGATCAAAACCTCAATCTCCCTTGAGGCGCATAGCCTCCTTCCTCGGATCACCATTCCGAAGAAAACATAGCATGTCCAAGAATGAAAAGGCTCAACCCTTGTTGAAGTGCTTCAGCTATGAACAGATAGCCAATGCTACTAATGAATTCCACCAAGATAATTTGGTCGGGAGAGGCGGATACTCGGAAGTATACAAAGGTGATCTTTGTGATGGAAGAAGCATTGCTGTGAAGAGATTGGCGAAGGACAACAATGATCCTAACAAGGAGAAAGAGTTCCTTATGGAATTGGGAGTTATTGGACATGTCTGCCATCCTAACACTGCATCCTTAGTTGGATGCTGCGTCGAAAATGGACTCTATCTAGTCTTCAATTACTCTCAGAATGGAAACTTGGCAACTGCACTGCACGGTAAAGGTGGAGATTCACTTGATTGGCCAATCAGATACAAGATTGCTATTGGAGTTGCAAGGGGGCTCCATTACCTTCATAAATGTTGCAAACACAGAATAATTCATCGCGATATCAAAGCTTCCAATGTTCTTCTAGGCCCTGATTATGAGCCAGAGATAACAGATTTTGGGCTTGCAAAGTGGCTTCCAAACAAGTGGAGTCATCATGCAGTGATCCCAGTAGAAGGGACATTCGGATACTTAGCACCAGAGTACTTCATGCATGGAATAGTGGATGAGAAAACAGATGTTTTTGCATTTGGTGTTCTTCTTCTTGAGATTGTAACTGGACGCAGACCTGTTGATTCATCAAGCCAAAACCTTCTCCTTTGGGCAAAGCCTCTGATGGAATCAGGGAATATTGGAGAGCTAGCTGATCCAAAAATGAATGGTAAATATGATGAAGAGCAACTCTATAGGTTGGTGCTTACAGCTTCATACTGTGTCAGACAAAATGCCACGTGGCGCCCTCCAATGAGCGAGGTGTTAGAGTTGCTGGCAAGTGGGAATGACTGTGAGGCAGGGAAAAGTTGGAGGATCCCAAAATTCACTTCAGATGAATTGGATGATTATTCCATGGTGTTTGGATATGATGTCCCCTCACACATATCTCTCGAGGATTTTCTCTGA 1812 0.4432 MVLAYPSKVLVGLSLDSDDSKELLSWAIRVLANPNDSIVAVHVLVTEDKKKRASVRKRQSQLRQAKAHVISMLGEFAQTCWSKQVNLEARVAFSSTVGGGLAEEAKSINADFLLLRGSRNPKNKNGSSKGISKYCFEHAHEGCTVVSVGKFAKAEQGSSSNPKHSQDDSEASSKWLSKDDDNQGDTAATFPVLNEFMSDSESKEQNSSPRTVLDALEGQSNSTEDDTFSTMVSSTCTTDTPKRRSKPQSPLRRIASFLGSPFRRKHSMSKNEKAQPLLKCFSYEQIANATNEFHQDNLVGRGGYSEVYKGDLCDGRSIAVKRLAKDNNDPNKEKEFLMELGVIGHVCHPNTASLVGCCVENGLYLVFNYSQNGNLATALHGKGGDSLDWPIRYKIAIGVARGLHYLHKCCKHRIIHRDIKASNVLLGPDYEPEITDFGLAKWLPNKWSHHAVIPVEGTFGYLAPEYFMHGIVDEKTDVFAFGVLLLEIVTGRRPVDSSSQNLLLWAKPLMESGNIGELADPKMNGKYDEEQLYRLVLTASYCVRQNATWRPPMSEVLELLASGNDCEAGKSWRIPKFTSDELDDYSMVFGYDVPSHISLEDFL* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1978 603 Gene3D HUPs 4 148 IPR014729 -
Ahy1g1978 603 Gene3D Phosphorylase Kinase; domain 1 256 369 - -
Ahy1g1978 603 PANTHER OS08G0249100 PROTEIN 6 593 - -
Ahy1g1978 603 MobiDBLite consensus disorder prediction 167 181 - -
Ahy1g1978 603 MobiDBLite consensus disorder prediction 217 244 - -
Ahy1g1978 603 Pfam Protein tyrosine and serine/threonine kinase 295 559 IPR001245 GO:0004672|GO:0006468
Ahy1g1978 603 Pfam Universal stress protein family 8 146 IPR006016 -
Ahy1g1978 603 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 140 - -
Ahy1g1978 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Ahy1g1978 603 CDD USP_Like 8 148 - -
Ahy1g1978 603 Gene3D Transferase(Phosphotransferase) domain 1 371 572 - -
Ahy1g1978 603 SUPERFAMILY Protein kinase-like (PK-like) 267 560 IPR011009 -
Ahy1g1978 603 ProSiteProfiles Protein kinase domain profile. 293 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1978 603 MobiDBLite consensus disorder prediction 154 187 - -
Ahy1g1978 603 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Ahy1g1978 603 SMART serkin_6 293 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1978 603 MobiDBLite consensus disorder prediction 217 251 - -
Ahy1g1978 603 PANTHER OS08G0249100 PROTEIN 6 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1978 Ahy-Chr1 96581399 96584701 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1978 226 556 Trihelix Transcription Factor Family AT1G68690 41.765 6.65e-74 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Ahy1g1978 PK_Tyr_Ser-Thr 8.70E-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1978 - - ccaj:109809416 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3000 11 147611672 147615154 Ahy1g1978 1 96581399 96584701 hybridization