Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1970 ATGGGGTTTGAGAAACATATTGGTAAGTATAGGCTTGGAAGGACAATTGGAGAAGGAACATTCTCTAAGGTTAAGCTTGCTGTTAATGGAGACAATGGAGAGAAAGTTGCAATCAAAGTCATTGATAAGCATATGGTCATGGAAAACAATCTTAAGAACCAGGTCAAAAGAGAGATTAGTACAATGAAACTTCTGCATCATCCCAATATTGTCAGAATTTTCGAGGTGATTGGGACAAAAACAAAAATATACATTGTGATGGAATATGTCTCAGGAGGACAAGTACTAGACAAGATGTCCTATGAGAAGAAGCTGAATGAACATGTGGCAAGGAAACTATTCCAGCAGCTTATTGATGCCATGGACTATTGCCATAACAAAGGAGTCTATCACAGAGATCTCAAGCCAGAAAACTTGTTGCTTGACAGCAAAGGAAACCTCAAAGTGTCTGACTTTGGATTAAGTGCACTCCAAAAGCCTAATGATGTCTTAAACACACGGTGTGGCTCCCCATGTTATGTGGCACCTGAGTTGATACTGAGCAAGGGATATGATGGAGCTTCTGCTGATGTTTGGTCATGTGGGGTGATTCTTTTTGAATTACTTGCAGGCTTCTTACCATTTGATGATCACAATTTGATGAACTTATATGAGAAGAGGATAACTATTCCAGATATTATTGAAGATGAGTGGTTTCAAACAGATTATGAACCTGCTTGTGTATCTGAATGTGTTAAGAACATTAAGCTGGATGATTGTAATGTTGCATTTGATTCAGTTGAGGAGAAAATCAGAGAATCAAAGATACCAAAGTCCTCAAGTTTCATTAATGCATTTCAACTAATAGCCATGTCACAGGACCTTGATCTTTCTGGCCTTTTTGAAGAAGAACAGGATCTCAAGAAGCAGAAGACAAGGTTTGGATCCAAACACACAATCAATGAAACAACAGAAAAAATTGAAGCTGCTGCAACAGATATGAGGTTGTCAGTAGAGAAAATAAACAACTTTAAGATAAAATTACACCCGAAACAGATGATGAATAGATGTTCTAGATCATACTTTGACCTATCAGCCCAGTTGATTGAAGTTGCTCCAACTCATTGTGTTGTAGAGATATCAAGATCTGCAGGAGATCTAAGAACATATACCAAATTCTGTGAAAGTCTATCAAGTCTGCTGGAACAAAAATCTGGTTTGACATCATCACAGGAGCAAGAAGAATCTAAGGATGTTGCTGATTCAACGCATTTATGA 1257 0.3779 MGFEKHIGKYRLGRTIGEGTFSKVKLAVNGDNGEKVAIKVIDKHMVMENNLKNQVKREISTMKLLHHPNIVRIFEVIGTKTKIYIVMEYVSGGQVLDKMSYEKKLNEHVARKLFQQLIDAMDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALQKPNDVLNTRCGSPCYVAPELILSKGYDGASADVWSCGVILFELLAGFLPFDDHNLMNLYEKRITIPDIIEDEWFQTDYEPACVSECVKNIKLDDCNVAFDSVEEKIRESKIPKSSSFINAFQLIAMSQDLDLSGLFEEEQDLKKQKTRFGSKHTINETTEKIEAAATDMRLSVEKINNFKIKLHPKQMMNRCSRSYFDLSAQLIEVAPTHCVVEISRSAGDLRTYTKFCESLSSLLEQKSGLTSSQEQEESKDVADSTHL* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1970 418 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Ahy1g1970 418 PANTHER SERINE/THREONINE KINASE 6 219 - -
Ahy1g1970 418 PANTHER SERINE/THREONINE KINASE 218 399 - -
Ahy1g1970 418 SUPERFAMILY Protein kinase-like (PK-like) 7 267 IPR011009 -
Ahy1g1970 418 Pfam NAF domain 274 333 IPR004041 GO:0007165
Ahy1g1970 418 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 219 - -
Ahy1g1970 418 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 218 399 - -
Ahy1g1970 418 SMART serkin_6 10 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1970 418 ProSiteProfiles Protein kinase domain profile. 10 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1970 418 Gene3D Phosphorylase Kinase; domain 1 2 89 - -
Ahy1g1970 418 Pfam Protein kinase domain 10 234 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1970 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Ahy1g1970 418 MobiDBLite consensus disorder prediction 397 418 - -
Ahy1g1970 418 Gene3D Kinase associated domain 1, KA1 271 397 - -
Ahy1g1970 418 CDD CIPK_C 277 396 - -
Ahy1g1970 418 ProSiteProfiles NAF domain profile. 271 295 IPR018451 GO:0007165
Ahy1g1970 418 Gene3D Transferase(Phosphotransferase) domain 1 90 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1970 Ahy-Chr1 96452704 96455935 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1970 87 394 CBL-interacting serine-threonine protein kinases AT5G57630 56.471 6.31e-125 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Ahy1g1970 Pkinase 1.40E-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1970 - - gmx:100786097 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3005 11 147704546 147707464 Ahy1g1970 1 96452704 96455935 hybridization