Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1965 ACTGTGGCTCAATCACCGCCGGCATCGAGCCTCAACGATGATAGCCGGCGTGTGAAGTTCCTGTGCAGCTTCCTGGGGAGCATAATGCCCCGCCCACAAGATGGGAAGCTGCGGTATGTTGGTGGAGAGACGCGTATTGTGAGTGTTCCAAGAGATGTTAGCTATGAGGAGTTGATGGGGAGGATGAGGGAACTATATGAAGGTGCTGCTGTGTTGAAGTATCAGCAGCCTGATGAGGATCTTGATGCACTTGTCTCTGTTGTGAATGATGATGATGTAGTTAACATGATGGAGGAGTACGACAAGTTGGGGTCTGGAGATGGGTTCACTAGGCTTAGGATTTTCTTGTTTTCGCAATTCGAGCAGGATGGTTCCTCACACTTCATTGATGGGGAGGACACTGAGAGGAGGTATGTTGATGCATTGAATAGTTTAAACGATGATTTCGGTAGGAAGTTGCAACAATCAGAGTTCAGTATGATGAGCCCTGTGGAAGATATCCATGTACCTGAACAGTTCTTTAGTCCACTTAGTGTGGAGAGTGGGATGCTTGGCCACAGAAATGGGGAACTATCTATGTCTCAGTATAATTTGCATCAGCTTGCAATGCAGCAACAGCAGCAGCAATCTATGGGACAGAGGTATAATGAAATGGATGCTCCATGGAATCCTTCCTATTTCTCTCCTAGGCATCATGCTCTCCATGACTCAAGATCGTTGGTGGAATATCCATCTTCTCCCACTGGTACAAGGTACCGTGTACAATTTCCTGAGATGCCGGATAAGAGCATTGATAGAGTGCAGGAAGAGTATGCTCGAATTCATGTGAGTCAACATCCTATCTATGACAATCAACAGCAATATTCTGAAAATGTAGTTTGGATGCCTACTGGTGAGAAGTCAGGTTTTCCAGGCAACATTCTTCATGGTGCCCATGTCATGGATGGGAACAGTAGATATGGTCAACCACATCCATGTGCGGAATGCCAATCAAACAGGGACAATTTTGCAGTGAATGCGGATGCAAAGTTTCATCCTGGAATCTATCCCAATGAGGATTCAAGAGGACATGCCTCGGGCTCAGGAAGAGTGAATGATCATTATGGTGGTGATGTTCCTGTTCCTGTTCCTGTTACAAATTTCTCCATTGGGCATGGTAGTGTGTCTGATGGACATAACTTATCTTCTAATTATATTCATCAACGAGCTGGACCTGAATTAGGGGCTGAACTTTTCCCTGACCAAACTGCAGCTGCTATACCACATCTGAAACTTCCTTCTCTGGAAGAGCACGGTATGCAGTACAGCAACCCATCTTCTTCCTTTGGAACAGATAATCATTATGCTGTGCCTCGTGGACATGTGCCTGGGCATCCTTTCTGGAGGAACACTCCAACTCCAGTTCATATTGGACCATCATACGAGGCAACTGCTCCACCTAATGGCATTATAAATGCTGGATTAATCAGGGGGGAGGGCAGTCCTGGATTTTTCATTGGATCAGATGGTCAAAATGCTTGGGTGGATCCCTCACAGAAATTGTCAGGTCATGATGGGTTAGACATCCCAGAACACCCTTCTGCACAAGCGCAGAAACACCCACTTCCAGTAGATAGTCTTCATCCCCCACAGGACAAAAATTCTGGTATCTACACAGAACATGTGCAGCTGCTAAAATCACCTCTTAATATGGTTCTGAACCAAGAGGTTTTAAGAAATGATACTCATATGACAGAGGCAATGAGTTTGCTATCTCGAAGTTTGCGTGAAGGAAAAGAGGAGAAATCCGAGGATATAGTTGAAAAATGTGCTGCACACATGCAGAAGATATCTTTTGCAGTGCAGAATAAAACTTCTGAGAATGTAAGCGGAGCTGCTAATCCTGTTGAGTCTAATAATTCAAACGCAAAACCTGCAGAAGAGGTTGCAAATGTTGAAAAACTGAGTAATAAGGACCCACCTGTTCCAGAAGATTCTAAGGATTTGGTCGATCAATTCAGCTTTTTGCCCGAGTTGATGGCTTCTGTCAAAAAGGCTGCATTAGAAGTTGCTGAGGAGGTGAAAACTACAGGTTGCATGAATCCTGATTCTCAGATACAGAATTCACCTCCAAATGAAGACACAACAAATGAAGTTGAACCAGTGAATGCTCATGGTGATCTAGAATTGGATGCTGAAATTGACCACGTAGATACTTCTAAAATTGAGCCTACTGAAGCTGAGGAAGAAGCAATCGCTAGGGGATTGCAGACAATAAAAAATGATGATTTGGAGGAAATCCGTGAACTAGGTTCTGGAACTTATGGGGCTGTTTATCATGGGAAGTGGAAAGGTTCTGATGTTGCTATTAAGAGAATAAAAGCCAGCTGTTTTGCTGGAAGACCGTCCGAAAGGGCTAGATTGATTGCAGATTTCTGGAAAGAGGCATTGATGCTGAGTTCATTGCATCATCCAAATGTTGTCTCTTTCTATGGCATTGTTCGTGATGGCCCTGATGGTTCTTTAGCAACTGTGACGGAATTCATGGTTAATGGATCTTTGAAACAGTTCTTGCATAAGAAGGATAGAACGATAGATCGTCGGAAGAGGCTCATCATAGCTATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAGAATATTGTGCATTTTGATTTGAAATGTGAGAATCTATTGGTCAATATGAGAGATCCACAACGTCCTGTCTGCAAGATTGGTGATTTAGGTTTATCAAAGGTTAAACAGCACACACTAGTGTCAGGAGGGGTACGTGGAACATTGCCATGGATGGCACCTGAACTTCTTAGTGGGAAAAGTAATATGGTATCGGAGAAGATTGATGTTTATTCATTTGGGATAGTCATGTGGGAATTGCTCACAGGGAATGAACCCTATGCTGATATGCATTGTGCTTCAATAATAGGAGGAATTGTGAACAACACTTTACGTCCTCAAATCCCGACATGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGTTGGGCTTCTGATCCTGCAGAAAGGCCATCTTTTTCAGAAATTTCGAAGAAGCTGAGGAGTATGGCTGCTGCAATGAATGTCAAATAG 3093 0.4368 TVAQSPPASSLNDDSRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDVSYEELMGRMRELYEGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRIFLFSQFEQDGSSHFIDGEDTERRYVDALNSLNDDFGRKLQQSEFSMMSPVEDIHVPEQFFSPLSVESGMLGHRNGELSMSQYNLHQLAMQQQQQQSMGQRYNEMDAPWNPSYFSPRHHALHDSRSLVEYPSSPTGTRYRVQFPEMPDKSIDRVQEEYARIHVSQHPIYDNQQQYSENVVWMPTGEKSGFPGNILHGAHVMDGNSRYGQPHPCAECQSNRDNFAVNADAKFHPGIYPNEDSRGHASGSGRVNDHYGGDVPVPVPVTNFSIGHGSVSDGHNLSSNYIHQRAGPELGAELFPDQTAAAIPHLKLPSLEEHGMQYSNPSSSFGTDNHYAVPRGHVPGHPFWRNTPTPVHIGPSYEATAPPNGIINAGLIRGEGSPGFFIGSDGQNAWVDPSQKLSGHDGLDIPEHPSAQAQKHPLPVDSLHPPQDKNSGIYTEHVQLLKSPLNMVLNQEVLRNDTHMTEAMSLLSRSLREGKEEKSEDIVEKCAAHMQKISFAVQNKTSENVSGAANPVESNNSNAKPAEEVANVEKLSNKDPPVPEDSKDLVDQFSFLPELMASVKKAALEVAEEVKTTGCMNPDSQIQNSPPNEDTTNEVEPVNAHGDLELDAEIDHVDTSKIEPTEAEEEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGNEPYADMHCASIIGGIVNNTLRPQIPTWCDPEWKSLMESCWASDPAERPSFSEISKKLRSMAAAMNVK* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1965 1030 SUPERFAMILY CAD & PB1 domains 34 122 - -
Ahy1g1965 1030 MobiDBLite consensus disorder prediction 692 711 - -
Ahy1g1965 1030 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 349 1030 - -
Ahy1g1965 1030 MobiDBLite consensus disorder prediction 508 548 - -
Ahy1g1965 1030 PANTHER - 8 236 - -
Ahy1g1965 1030 SMART serkin_6 757 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1965 1030 Gene3D - 36 120 - -
Ahy1g1965 1030 CDD STKc_MAP3K-like 763 1020 - -
Ahy1g1965 1030 PRINTS Tyrosine kinase catalytic domain signature 991 1013 IPR001245 GO:0004672|GO:0006468
Ahy1g1965 1030 PRINTS Tyrosine kinase catalytic domain signature 947 969 IPR001245 GO:0004672|GO:0006468
Ahy1g1965 1030 PRINTS Tyrosine kinase catalytic domain signature 876 894 IPR001245 GO:0004672|GO:0006468
Ahy1g1965 1030 PRINTS Tyrosine kinase catalytic domain signature 839 852 IPR001245 GO:0004672|GO:0006468
Ahy1g1965 1030 Pfam Protein tyrosine and serine/threonine kinase 758 1020 IPR001245 GO:0004672|GO:0006468
Ahy1g1965 1030 ProSiteProfiles Protein kinase domain profile. 757 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1965 1030 PANTHER - 349 1030 - -
Ahy1g1965 1030 Gene3D Phosphorylase Kinase; domain 1 743 843 - -
Ahy1g1965 1030 SMART PB1_new 32 117 IPR000270 GO:0005515
Ahy1g1965 1030 SUPERFAMILY Protein kinase-like (PK-like) 749 1018 IPR011009 -
Ahy1g1965 1030 Gene3D Transferase(Phosphotransferase) domain 1 844 1030 - -
Ahy1g1965 1030 Pfam PB1 domain 33 118 IPR000270 GO:0005515
Ahy1g1965 1030 CDD PB1_UP2 21 117 - -
Ahy1g1965 1030 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 8 236 - -
Ahy1g1965 1030 ProSitePatterns Protein kinases ATP-binding region signature. 763 784 IPR017441 GO:0005524
Ahy1g1965 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 882 894 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1965 Ahy-Chr1 96423117 96428171 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1965 12 1030 MAP Kinase Kinase Kinase AT5G57610 54.304 0.0 1022
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Ahy1g1965 PK_Tyr_Ser-Thr 5.50E-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1965 - - gmx:100779077 1489.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3010 11 147743496 147749450 Ahy1g1965 1 96423117 96428171 hybridization
Ahy1g1965 1 96423117 96428171 Ahy13g2567 13 86013035 86021210 PCT
Ahy1g1965 1 96423117 96428171 Ahy3g2246 3 77471380 77479552 PCT
Ahy13g2567 13 86013035 86021210 Ahy1g1965 1 96423117 96428171 PCT
Ahy3g2246 3 77471380 77479552 Ahy1g1965 1 96423117 96428171 PCT