Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1953 ATGGAATCTGCTACAGCCGCTCCCACTCAACAAGAATTCATCTTCCGATCCAAGCTTCCTGACATTCCCATCCCCACCCACCTTCCTCTCCATTCTTACTGCTTTCAGAATCTTCCACTCTTCCATGACCGCCCGTGCCTCATCGACGCCGAAACCGCCACCACGCTAACCTATGCCGACGTCCACCTCGCCACCCGCCGCATCTCCGCCGGTCTCCACTCCATCGGCATCCGCAAGGGTGACGTCATCATGCTCGTCCTCCGCAACTGCCCCGAATTCGCCCTCGCTTTCCTTGGCGCCTCCCGCTGCGGCGCCCCCGTCACGACCGCCAACCCCTTCTACACTCCCGCCGAGCTGGCCAAGCAAGCCACCGCCACCAAAACTAAGCTCATCATAACGCAATCCGCTTACGTCGAGAAATTCAAAGAGTACCTGGAAACAAACAACAACGACGTCAAGATCATGTGCATTGATGGTTCCCCTGAAGAATCACAGGACACTAGTGTTCTGCACTTTTCCCTTCTCACAAATTCCAATGAAAACGACGAGCCTGAAGTTAACATCACCCCCGACGATCTCGTGGCGATCCCGTTCTCCTCCGGGACATCGGGGCTGCCAAAGGGGGTGATGTTAACGCACAGCAACCTGGTAACCACGGTGGCGCAACTTGTTGACGGCGAGAATCCTCATCAGTACACGCACAGCGAGGACGTTCTCCTCTGCGTGCTGCCAATGTTTCACATATACGCACTGAACTCGATCTTGTTATGTGGCATTCGAGCGGGTGCGGCGGTTCTGATCGTGCAGAAGTTTGAGATAACGACTCTGATGGAGTTGATAGAGAAGTACAGGGTGACGGTGGCGTCTCTGGTGCCGCCGATAGTGTTGGCGGTGGTGAAGAGTGGGGATACTCACAGGTATGATCTGTCTTCGATTCGTGGGGTGATATCAGGTGCCGCTCCCATGGGAATGGAGCTTCAGGAAGCTGTGAAGGCTAGGCTTCCCCATGCCACTCTCGGACAGGGCTATGGGATGACAGAAGCGGGGCCACTTGCCATAAGCTTAGCATTTGCAAAGGAACCATTCAACGTTAAATCAGGTGCATGCGGCTCCGTCGTTAGAAACGCTGAGATGAAAATCGTCGACACTGACACTGGTACTTCCCTTCCACCTAACAAACCCGGTGAAATTTGCATTCGAGGCACTAAAGTCATGAAAGGGTACCTGAATGACCGAGAGGCGACGGAGAGAACCATAGACAAAGAAGGATGGTTACACACGGGTGACATTGGTTACATTGATGATGATGATGAGCTCTTCATCGTTGATCGCTTGAAGGAGCTTATCAAATACAAAGGATACCAAGTGGCACCTGCTGAGCTGGAATCTTTGTTGATTGCCCACCCAAACATCTCTGATGCCGCTGTTGTACCGCTGAAAGATGAAGTTGCTGGAGAAGTACCAGTTGCATTTGTTGTGAGATCAAATGGTTCTAATATCACCGAGGATGAAATCAAGAAATATATTTCTAAACAGGTGGTATTTTACAAGAGAATAAACAGAGTGTTCTTCACTGAAAGTATTCCAAAAGCAGCGTCAGGTAAAATTCTGAGGAAGGTATTAACAGCAAGGCTTAACGAAGGTTTGGTGACCAATTAG 1659 0.5112 MESATAAPTQQEFIFRSKLPDIPIPTHLPLHSYCFQNLPLFHDRPCLIDAETATTLTYADVHLATRRISAGLHSIGIRKGDVIMLVLRNCPEFALAFLGASRCGAPVTTANPFYTPAELAKQATATKTKLIITQSAYVEKFKEYLETNNNDVKIMCIDGSPEESQDTSVLHFSLLTNSNENDEPEVNITPDDLVAIPFSSGTSGLPKGVMLTHSNLVTTVAQLVDGENPHQYTHSEDVLLCVLPMFHIYALNSILLCGIRAGAAVLIVQKFEITTLMELIEKYRVTVASLVPPIVLAVVKSGDTHRYDLSSIRGVISGAAPMGMELQEAVKARLPHATLGQGYGMTEAGPLAISLAFAKEPFNVKSGACGSVVRNAEMKIVDTDTGTSLPPNKPGEICIRGTKVMKGYLNDREATERTIDKEGWLHTGDIGYIDDDDELFIVDRLKELIKYKGYQVAPAELESLLIAHPNISDAAVVPLKDEVAGEVPVAFVVRSNGSNITEDEIKKYISKQVVFYKRINRVFFTESIPKAASGKILRKVLTARLNEGLVTN* 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1953 552 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 9 545 - -
Ahy1g1953 552 Pfam AMP-binding enzyme C-terminal domain 460 535 IPR025110 -
Ahy1g1953 552 CDD 4CL 24 541 - -
Ahy1g1953 552 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 545 - -
Ahy1g1953 552 ProSitePatterns Putative AMP-binding domain signature. 196 207 IPR020845 -
Ahy1g1953 552 SUPERFAMILY Acetyl-CoA synthetase-like 13 547 - -
Ahy1g1953 552 Pfam AMP-binding enzyme 42 451 IPR000873 -
Ahy1g1953 552 Gene3D - 446 549 IPR045851 -
Ahy1g1953 552 Gene3D - 6 445 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1953 Ahy-Chr1 96268283 96272769 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1953 12 513 Monolignol Biosynthesis Gene Families AT1G51680 65.217 0.0 651
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1953 K01904 - gmx:548034 890.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3020 11 147857143 147862037 Ahy1g1953 1 96268283 96272769 hybridization