Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1952 ATGGAACCAACAAGAAACCATGATCATCATCACGGTGGTGACCATCACTTTATTTTCCGTTCCAAGCTGCCCGACATTTACATCCCAACCCACCTCCCTCTCCACACTTACTGCTTTCAGAATCTCTCCCACTTCAAGGACCGTCCTTGCCTCATCAACGCCACCACCGGCGTTACTTTCACCTACGCCGCCGTCGAACTAACCGCCAGAAAAGTCGCCGCCGGACTCAACAACCTAGGTGTTCGTCAAGGCGACGTCATCCTCCTCCTCCTCCAGAACTGCCACCAGTTTGTCTTCGCCTTCCTTGGCGCCTCCTACCGTGGTGCCATCGTCACCACCGCCAACCCCTTCTACACCCCCGCCGAGGTCGCCAAGCAGGCCACCGCCTCCGCTGCTAAGCTCATAATAACTCAGTCGTCGTTCGTGGACAAGGTAAAGGATCTGGCCAGGGACAAACACATCAAGGTCGTGTGCATCGACGCGCCGCCGCAGGGGTGCCTTGACTTCTCGGAGCTAACAGAGGCGGATGAGGGCGACATCCCTGCCGTGAAAATCTTCCCGGATGATGTAGTTGCGCTGCCGTATTCGTCCGGCACGACGGGGCTCCCAAAAGGGGTGATGCTAACACACAAAGGGTTAGTGACGAGCGTGGCTCAGCAGGTGGACGGAGAGAACCCCAATCTGTACATTCAGCACGATGATGTGGTGGTTTGCGTGCTTCCACTGTTCCACATTTACTCGCTGAATTCGGTTCTGCTGTGCGGGCTTCGAGTAGGGGCTGCAATAGTGATAATGCACAAGTTTGAGGTGGTGGGGCTGCTTCAAGTGGTTGAGAAGCACAGGGTGAGCGTTGCGCCATTAGTGCCTCCGATTGTTCTTGCGATAGTAAAGAGCCGGGAGGTGACACGCTACGACTTATCGTCCATTCGGATGGTGATGTCCGGTGCGGCCCCATTGGGTAAGGACCTTCACGATGCTTTTAGGGCCATGCTTCCTAATGCCACCTTTGGCCAGGGTTATGGGATGACGGAAGCAGGTCCAGTGCTTTCGATGTGTTTAGCGTTTGCAAAGGAACCTTTTGAGGTGAAATCATCAGGTGCGTGCGGGACCGTCGTAAGAAACGCAGAGATGAAGATTGTGGATCCTCTCACGGCTGCTTCCCTCCCCAGAAATCATGCCGGTGAGATTTGCATCAGAGGCAACCAGATTATGAAAGGTTACTTAAACGACCCTAAGGCGACAGAAGATACCATAGACAAAGAGGGATGGTTGCACACGGGTGATATAGGATATATGGACGACAACGATGAGCTATTCATCGTTGACCGCTTAAAGGAGTTGATCAAATACAAAGGATTTCAAGTGGCTCCCGCTGAGCTCGAAGCTATGTTGATTTCTCACCCTAACATTTCCGATGCAGCTGTTATAGCCATGAAAGATGAGGCAGCAGGAGAGGTTCCTGTTGCATTTGTTGTAAGATCAAACGCGTCTAAGATATCGGAGGATGAAATCAAGCTATATATCTCAAAGCAGGTTGTGTTTTACAAGAGAATCAACAAAGTTTTCTTTGTGGATTCAATCCCAAAGGCACCGTCAGGTAAGATTTTACGAAAACACCTCAGAGCAAGGCTTGCATCTGGCCTTGAAATTTAG 1653 0.516 MEPTRNHDHHHGGDHHFIFRSKLPDIYIPTHLPLHTYCFQNLSHFKDRPCLINATTGVTFTYAAVELTARKVAAGLNNLGVRQGDVILLLLQNCHQFVFAFLGASYRGAIVTTANPFYTPAEVAKQATASAAKLIITQSSFVDKVKDLARDKHIKVVCIDAPPQGCLDFSELTEADEGDIPAVKIFPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYIQHDDVVVCVLPLFHIYSLNSVLLCGLRVGAAIVIMHKFEVVGLLQVVEKHRVSVAPLVPPIVLAIVKSREVTRYDLSSIRMVMSGAAPLGKDLHDAFRAMLPNATFGQGYGMTEAGPVLSMCLAFAKEPFEVKSSGACGTVVRNAEMKIVDPLTAASLPRNHAGEICIRGNQIMKGYLNDPKATEDTIDKEGWLHTGDIGYMDDNDELFIVDRLKELIKYKGFQVAPAELEAMLISHPNISDAAVIAMKDEAAGEVPVAFVVRSNASKISEDEIKLYISKQVVFYKRINKVFFVDSIPKAPSGKILRKHLRARLASGLEI* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1952 550 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Ahy1g1952 550 Gene3D - 10 444 IPR042099 -
Ahy1g1952 550 CDD 4CL 28 540 - -
Ahy1g1952 550 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 14 544 - -
Ahy1g1952 550 SUPERFAMILY Acetyl-CoA synthetase-like 15 546 - -
Ahy1g1952 550 Pfam AMP-binding enzyme 41 450 IPR000873 -
Ahy1g1952 550 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Ahy1g1952 550 Gene3D - 445 546 IPR045851 -
Ahy1g1952 550 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 14 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1952 Ahy-Chr1 96248104 96252118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1952 9 512 Monolignol Biosynthesis Gene Families AT1G51680 68.421 0.0 698
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1952 K01904 - gmx:100779668 879.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3021 11 147874025 147879106 Ahy1g1952 1 96248104 96252118 hybridization