Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1944 ATGGATACTGGAGAGGAGTACTCACTTGTTATTGAACTATCTGAAAACGATCTTTTCTTTGAACAAAAGAAGAAATTACTAGAAAATAAGGGTTTTCGACCCAAGGAACGAATATACCTCAAGGGTACCTCAAAGCTTGGTTGGGTGAATGCTACCGTAAAGGTTTTACTGCAGATTGCGCGAATTATACAGTTAAATGAGCTGGAACTTTATTTTGCCGAAGATGATGGATGTCCTTTAGTGGAGTTTTACAGCCCCAGGAATGAGTTAGAGGCTTTCGATTCAATTCTTTCACTTGTTGACATATCACTTTCTTGTGCAAATCTCCATACAAATATCCTGGAATTGTTACGACAAACAATTCTTGATTTGATTTCTGATTTTGGGGATAAGAATAGTGTGAAGGGAATAGTTGAAAGAGACCATGGTATTGACCAGGAAGAACGCCTGATAAAATGGGCAGAAAGCAATGGTGTAAGGACACAGCTAAAAATTGCTTATGTCCAAGGTGCAGGACGTGGTGCAATAGCGAGGGAGGATCTCAAAGTTGGAGACATTGCTTTAGAAATTCCTAGTTCCATTATCATTTCCGAGGAGCTTGTTTGTGAAACTGATATGTATCATGTCTTAAAAGAGGTTGATGGCATATCTTCAGAGACAATATTGCTGCTGTGGAGTATGAAAGAGAAGTACAACGTCAATTCAAAATTCAAAATATACTTTGACACACTCCCGGAAAAATTCAATACAGGATTGAGTTTTGGCATTGAAGCAATTACAATGTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCAAGACAGCACCTGCATGCTCAGTATGACGAGTTGTTCCCTGCTTTGTGTAACAACTTCCCTGAGATATTTCCAGTAGAGCTGTATACATGGGAGAAATTTTTATGGGCTTGTGAACTTTTTTACTCCAATAGCATGAAGATAATGTTCCCTGATGGAAAGCTGACGACATGCTTGATCCCTATAGCTGGCTTTCTTAATCATTCACTGTGCCCACATATTTTGCACTATGGCAAAGTAGATGCTACTACAAATTCATTGAAATTTCGTCTATCAAGACCATGCAAATCTGGAGAAGAATGCTGCTTAAGCTATGGGAACTTCTCCAGTTCTCATCTAATTACCTTCTATGGTTTCTTACCGCGAGGAGACAACCCATATGATACCATTCCATTAGATATTGATGGTTCTGATGTTGATTATGTTGAGGATAAATGCCCGCCCAACTGGACGACTCACATGGTGCGTGGTACTTGGCTCTCCAACAATCACAGCCTATTCTATTATGGCCTTCCCTCTCCATTATTGGACCATCTTCGGAGATCTCGAAGTCCCATGCTGAATACGAAGACCTTGTTGCAAGGAAACTTGGAAAATGAGCTGCAAATTCTTGAAGATCTAATATATATATTTGATGACATGATTGACAACATGGGTGAGAGCGATTTTGATGACAGAGAAAACTGCAGCTGGGATGGAAAATTGGCAATGGATTTTAAGAATCTACAAAGACGAATTGCGTGTTCTGTTTCAAGCTCATGTCATAATGGTGTCAACATGTTGACGAATGAATTAAACAAGTGCATGGCTGAGGACACACGAGGCTAA 1647 0.3971 MDTGEEYSLVIELSENDLFFEQKKKLLENKGFRPKERIYLKGTSKLGWVNATVKVLLQIARIIQLNELELYFAEDDGCPLVEFYSPRNELEAFDSILSLVDISLSCANLHTNILELLRQTILDLISDFGDKNSVKGIVERDHGIDQEERLIKWAESNGVRTQLKIAYVQGAGRGAIAREDLKVGDIALEIPSSIIISEELVCETDMYHVLKEVDGISSETILLLWSMKEKYNVNSKFKIYFDTLPEKFNTGLSFGIEAITMLDGTLLLEEIMQARQHLHAQYDELFPALCNNFPEIFPVELYTWEKFLWACELFYSNSMKIMFPDGKLTTCLIPIAGFLNHSLCPHILHYGKVDATTNSLKFRLSRPCKSGEECCLSYGNFSSSHLITFYGFLPRGDNPYDTIPLDIDGSDVDYVEDKCPPNWTTHMVRGTWLSNNHSLFYYGLPSPLLDHLRRSRSPMLNTKTLLQGNLENELQILEDLIYIFDDMIDNMGESDFDDRENCSWDGKLAMDFKNLQRRIACSVSSSCHNGVNMLTNELNKCMAEDTRG* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1944 548 ProSiteProfiles SET domain profile. 161 379 IPR001214 GO:0005515
Ahy1g1944 548 PANTHER BNAA07G01600D PROTEIN 10 544 - -
Ahy1g1944 548 Gene3D set domain protein methyltransferase, domain 1 145 393 - -
Ahy1g1944 548 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 10 544 - -
Ahy1g1944 548 Pfam SET domain 172 379 IPR001214 GO:0005515
Ahy1g1944 548 CDD SET_LSMT 163 393 - -
Ahy1g1944 548 Gene3D - 2 128 IPR036464 -
Ahy1g1944 548 SUPERFAMILY SET domain 146 400 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1944 Ahy-Chr1 96161609 96175613 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Ahy1g1944 SET 3.20E-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1944 K19199 - gmx:100778605 898.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3028 11 147919990 147925910 Ahy1g1944 1 96161609 96175613 hybridization