Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1932 ATGTATGCCAGCCAGTTTGACGGCAACGCCGCCTTCTCCGGCGGCGGTTTCATGCCCTCTCAGACCACTCAGTCCCATGACTCTTCCTCCACCTTCCCTACTTCCAGAAATCGGGATGCTCAGTCGTTGCTACCTTTGACGGTGAAGCAGATAAACGATGCGTATAACTCGAGCGATAATAAATCCAATTTGATTGTCGATGGTGTTGATGTCAACACTGTTACACTCGTAGGAAGGGTATGCAACAAAAATGGGATGATTACTGAAGTTCATTTTGTCCTTGATGATGGCACTGGAAGGATTGAGTGTAATAAATGGCTTCAAGAAGCAGCGGAATCAAATGAAGTGGACGGTATCATGGATGGAGTATATGTGCGTCTTCATGGACAATTAAAAGGCCTTAATGGGAAAAGGATTTTGAATGTTTTCTCGTTTAGGCCTGTGACTGACTTTAATGAGATTGCCAGCCATTTCATTGAATGTATATATGTTCATCTCTACAATTCCAAGCTAAAGGCTGCTGTTCCTAACCAGCAACATGTTACAAATTCAACACCAATAACACCCACAAAAGGTTACCAAGTTCTCCCACCAAATCAACATAACAATGGTCAGCCGAGGTTCGAAGAAATGGTCCTGGATTTTTTGCATCTTCCCCCACACAGTGCATCGGAAGGGGGAGTCTCTATTAAACTTATTGAAGAGCAACTACGACTTCCTAAGGACAAGCTGATGTTGGCTATCAAAAATCTTATTGACGAAGGCCAGATTTATGAAGCTATAAGTGATCACTATAAGTCAACCATCAATGGTTGA 816 0.4289 MYASQFDGNAAFSGGGFMPSQTTQSHDSSSTFPTSRNRDAQSLLPLTVKQINDAYNSSDNKSNLIVDGVDVNTVTLVGRVCNKNGMITEVHFVLDDGTGRIECNKWLQEAAESNEVDGIMDGVYVRLHGQLKGLNGKRILNVFSFRPVTDFNEIASHFIECIYVHLYNSKLKAAVPNQQHVTNSTPITPTKGYQVLPPNQHNNGQPRFEEMVLDFLHLPPHSASEGGVSIKLIEEQLRLPKDKLMLAIKNLIDEGQIYEAISDHYKSTING* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1932 271 CDD RPA2_DBD_D 73 166 - -
Ahy1g1932 271 PIRSF RPA32 1 269 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Ahy1g1932 271 Pfam Replication protein A C terminal 165 263 IPR014892 -
Ahy1g1932 271 Gene3D - 199 269 IPR036388 -
Ahy1g1932 271 SUPERFAMILY "Winged helix" DNA-binding domain 204 268 IPR036390 -
Ahy1g1932 271 MobiDBLite consensus disorder prediction 14 37 - -
Ahy1g1932 271 Gene3D - 35 170 IPR012340 -
Ahy1g1932 271 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 2 268 - -
Ahy1g1932 271 MobiDBLite consensus disorder prediction 15 37 - -
Ahy1g1932 271 PANTHER REPLICATION PROTEIN A-RELATED 2 268 IPR040260 -
Ahy1g1932 271 SUPERFAMILY Nucleic acid-binding proteins 43 169 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1932 Ahy-Chr1 96053995 96057621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1932 1 221 Core DNA Replication Machinery Family AT3G02920 49.785 1.16e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1932 K10739 - gmx:100782819 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3043 11 148017816 148021363 Ahy1g1932 1 96053995 96057621 hybridization