Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1931 ATGGACTCTTCCTCTTCTTCATCCCTTCCTTTCTCTCTCTCCAACCACTCTTCTTCCTCTCCTCTCTCCCTCTTCCACCCCTCCTTCACCGACGCCGCCGATGCCCGATCAACTAACCTCTCCATATTCACCGGGGTCCCCAAGTTCGAGGATTTCCTCGGTGCCTCCGCCGCAACTGCACCCACCGCCACAACACCATCTGCACCACCGCCCCCGCCGCAGCAGCAGCTTGCTCAGTTCTCCACCGAAAACAACAACGGCGTGATATATGACTCTGAACTGAAGACAACGATAACCGCCTGCTTCCCTGGCGGTTTCGGCGGCGGAGCTTCAAATGGCGCTGAACTGAGTCAGAAGCCATCTCCAAAGAAAACTGTGGACACCTTCGGCCAACGCACCTCCATCTACCGCGGAGTCACAAGACATAGATGGACAGGGAGATATGAAGCTCATCTATGGGATAACAGCTGCAGAAGGGAAGGACAAAGTAGGAAAGGAAGACAAGTTTATTTGGGTGGCTATGACAAGGAAGAGAAAGCGGCCAGAGCTTATGATCTCGCTGCTCTCAAGTACTGGGGTCCAACCACTACCACCAACTTTCCGGTTTCCAACTATGAGAGGGAGCTAGAGGAAATGAAGAACATGACAAGACAAGAGTTTGTTGCTTCTCTAAGAAGGAAGAGCAGTGGATTCTCTAGGGGGGCGTCTATATACAGAGGAGTGACTAGGCACCACCAGCATGGGCGATGGCAGGCAAGAATAGGCAGAGTAGCCGGAAACAAAGACCTGTACCTTGGCACTTTCAGTACCCAAGAAGAAGCTGCAGAGGCTTATGACATTGCAGCAATAAAATTCAGAGGACTCAACGCAGTGACCAACTTCGACATGAGTCGCTACGACGTCAAGAGCATTGCTAACAGCACCCTTCCCATCGGCGGACTATCAAACAAGAACAAGAACTCCGCCGATGACCCCGTCGTCACTCAACCACCACCACCACCACCTTCAAGCTCCACCCTCAGCTTCGCCATTCCCATCAAACAAGACCCTTCCGCAGATTACTGGTCCATCATTGGCTACTCCAATAACACACAGCTGGAAAGTGCCAGGGGTACAAATGTAATTGCAACAGCAGCAACCTCTTTTCTACCTCCCAACAACAATGGCAATGGCATGATGGAGTTCTCCGCTGCCCCTTCAGCGGACGGATTCTTGAACGGAGGAGGGATCTTTGTTAGCCACAATCATCATCAAGAAGAGAGTGGTGGTTGTTCCTCACCATCTTCGGGTGGTTCTTCAATCCCATTGGCAACGCCAATATTTTCCTTAAATAGCAACAATAATTATGAGAACTGGATTGGTCCAACACTGCACACATTCCAAGCTCATGCAAAACCCAGTCTCTTTCAAACGCCAATATTTGGAATGGAATGA 1434 0.507 MDSSSSSSLPFSLSNHSSSSPLSLFHPSFTDAADARSTNLSIFTGVPKFEDFLGASAATAPTATTPSAPPPPPQQQLAQFSTENNNGVIYDSELKTTITACFPGGFGGGASNGAELSQKPSPKKTVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGYDKEEKAARAYDLAALKYWGPTTTTNFPVSNYERELEEMKNMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKSIANSTLPIGGLSNKNKNSADDPVVTQPPPPPPSSSTLSFAIPIKQDPSADYWSIIGYSNNTQLESARGTNVIATAATSFLPPNNNGNGMMEFSAAPSADGFLNGGGIFVSHNHHQEESGGCSSPSSGGSSIPLATPIFSLNSNNNYENWIGPTLHTFQAHAKPSLFQTPIFGME* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1931 477 SUPERFAMILY DNA-binding domain 236 297 IPR016177 GO:0003677
Ahy1g1931 477 PRINTS Ethylene responsive element binding protein signature 277 297 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 PRINTS Ethylene responsive element binding protein signature 136 147 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 CDD AP2 236 297 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 ProSiteProfiles AP2/ERF domain profile. 237 295 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 111 325 - -
Ahy1g1931 477 ProSiteProfiles AP2/ERF domain profile. 135 201 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 Gene3D AP2/ERF domain 237 297 IPR036955 GO:0003700|GO:0006355
Ahy1g1931 477 Gene3D AP2/ERF domain 135 203 IPR036955 GO:0003700|GO:0006355
Ahy1g1931 477 SMART rav1_2 135 207 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 SMART rav1_2 237 301 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR BBM 111 325 - -
Ahy1g1931 477 CDD AP2 134 203 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 SUPERFAMILY DNA-binding domain 134 203 IPR016177 GO:0003677
Ahy1g1931 477 Pfam AP2 domain 237 287 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 Pfam AP2 domain 135 193 IPR001471 GO:0003700|GO:0006355
Ahy1g1931 477 MobiDBLite consensus disorder prediction 59 78 - -
Ahy1g1931 477 MobiDBLite consensus disorder prediction 1 26 - -
Ahy1g1931 477 MobiDBLite consensus disorder prediction 310 325 - -
Ahy1g1931 477 MobiDBLite consensus disorder prediction 310 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1931 Ahy-Chr1 96030032 96033166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1931 89 477 AP2-EREBP Transcription Factor Family AT5G57390 57.845 1.71e-147 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Ahy1g1931 AP2 3.50E-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1931 K09285 - gmx:100803558 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3044 11 148034106 148037283 Ahy1g1931 1 96030032 96033166 hybridization