Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1919 ATGGCGGCAATCACCCTAGAGGAGATCAAGAACGAGACTGTTGATTTGGAGCGTATTCCTATTGAGGAAGTGTTCCAGCAACTGAAATGTTCGAGAGAAGGTTTGTCATCGGACGAAGGAGCCAATCGGCTTCAAATATTTGGCCCAAACAAGCTAGAAGAGAAGAAGGAAAGCAAACTCCTCAAGTTTCTTGGGTTCATGTGGAATCCCCTGTCATGGGTCATGGAAGCTGCAGCTATCATGGCTATTGCACTTGCAAATGGTGATAGCAAGCCTCCGGATTGGCAAGATTTCGTTGGTATCATTTGCTTGTTGTTTATTAACTCCACCATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGACTTGCTCCCAAGACTAAGGTCCTTAGAGGTGGAAAATGGTCTGAGGAAGAAGCAGCAATTCTGGTCCCTGGAGACATCATTAGCATCAAACTAGGTGATATCGTTCCTGCTGATGCTCGTCTTCTTGAGGGTGATCCTTTAAAGATCGATCAATCCGCTCTTACCGGAGAGTCCCTTCCAGTCACCAAGAATCCAGGGGATGAGGTTTTCTCTGGCTCAACTTGTAAACAAGGTGAAATTGAAGCCGTCGTCATTGCAACTGGTGTCCACACATTCTTTGGCAAGGCAGCACACCTTGTGGATAGCACCAACCAAGTTGGACACTTCCAGAAGGTTCTCACAGCAATTGGAAACTTCTGCATATGTTCCATTGCTGTTGGTATGTTGGCTGAGATCATAGTCATGTACCCTATTCAGCATCGCAAATATAGAGATGGAATTGACAACCTGTTGGTCCTCTTGATTGGTGGAATCCCCATTGCTATGCCAACTGTGTTGTCTGTCACAATGGCCATTGGCTCTCACAGGCTCTCTCAGCAGGGTGCTATCACCAAGCGTATGACTGCCATTGAAGAAATGGCCGGCATGGATGTCCTCTGCAGTGACAAGACTGGGACACTCACCCTGAACAAGCTGAGCGTTGACAGGAACTTGATTGAGGTTTTTGCAAAGGGTGTGGACAAGGAACATGTTATCCTTCTTGCTGCAAGGGCTTCCAGGACTGAAAACCAGGATGCAATAGATGCTGCCATTGTTGGAATGCTTGCCGACCCAAAAGAGGCAAGGGCTGGGATAAGAGAGGTGCATTTCTTGCCATTCAATCCAGTTGACAAGAGAACAGCTTTGACTTACATCGATTCTGATGGAAATTGGCACAGGGCAAGCAAAGGTGCTCCTGAGCAGATCATTGCCTTGTGTAACCTTAGGGAAGATGCTAAGAAAAGGTGCCATGCTATTATTGACAAGTTTGCAGACAGAGGGCTTCGTTCGCTCGCTGTTGCTAGACAGGAAGTTCCAGAGAGAACAAAGGAAAGTGCCGGTGGTCCATGGCAGTTTGTTGGTTTGTTGCCACTATTTGATCCCCCAAGACATGATAGTGCTGAGACTATCCGACAAGCTCTTAACCTCGGCGTAAATGTCAAGATGATTACTGGTGATCAACTTGCCATTGCTAAGGAGACCGGCCGGAGGCTTGGGATGGGAACAAATATGTATCCGTCTGCTTCCTTACTTGGTCAAGACAAGGATGCAAGTATTGCTGCACTTCCAGTGGAAGAGCTGATTGAGAAGGCTGATGGATTTGCTGGAGTATTTCCAGAGCACAAATATGAAATTGTCAAAAAGTTACAAGAGAGGAAACACATTTGTGGAATGACCGGAGATGGTGTCAATGATGCTCCTGCTTTGAAGAAGGCTGATATTGGAATTGCTGTTGCTGATGCCACTGATGCTGCAAGAAGTGCTTCTGATATTGTCTTGACTGAACCAGGATTGAGTGTTATTGTTAGTGCAGTCTTAACCAGCAGAGCTATTTTCCAAAGAATGAAGAACTATACGATCTATGCAGTATCTATCACCATCCGTATAGTGTTTGGCTTCATGCTCATTGCACTTATCTGGAAGTTCGACTTCTCGCCTTTCATGGTTTTGATCATTGCCATTCTAAATGATGGAACAATAATGACAATTTCGAAGGATCGTGTGAAGCCATCTCCCTTGCCTGATAGCTGGAAACTGCAAGAAATATTCGCCACTGGGACTGTTCTTGGAAGTTACTTGGCATTGATGACTGTCATATTCTTCTGGGCAATGAAAGAAACTAGCTTCTTCCCTGAAAAATTTGGAGTTAGACACCTTAGTCATGATGAAATGATGTCTGCTCTATATCTACAAGTCAGTATTGTTAGCCAGGCTTTGATCTTTGTAACTCGTTCACGCAGCTGGTCTTTCGTTGAACGCCCCGGATTGTTATTGGTCTCTGCTTTTATTATTGCTCAGCTGATTGCTACAATCATAGCAGTATATGCGGATTGGGGATTCGCAAAGGTGAAAGGAATTGGTTGGGGTTGGGCTGGAGTCATCTGGCTCTACAGTGTTGTCTTCTATATTCCTCTGGACTTCATGAAGTTCGCCATCCGCTACATCTTGAGCGGCAAGGCTTGGGTAAATCTGCTAGAAAACAAGACTGCCTTCACCACCAAGAAAGACTATGGTAAGGAAGAGAGGGAAGCTCAGTGGGCTCTTGCTCAGAGGACTCTGCATGGTCTTCAACCACCGGATACTTCCGGCATCTTCAATGAGAAGAATAGTTATAGGGAACTCTCCGAGATTGCCGAGCAAGCCAAGAGAAGAGCCGAAGTTGCAAGGCTTCGTGAGCTTCACACACTAAAGGGACATGTTGAGTCAGTGGTGAAGCTAAAAGGTTTGGACATTGATACAATCCAACAGCACTATACTGTCTGA 2850 0.4558 MAAITLEEIKNETVDLERIPIEEVFQQLKCSREGLSSDEGANRLQIFGPNKLEEKKESKLLKFLGFMWNPLSWVMEAAAIMAIALANGDSKPPDWQDFVGIICLLFINSTISFIEENNAGNAAAALMAGLAPKTKVLRGGKWSEEEAAILVPGDIISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKNPGDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGMLAEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDRNLIEVFAKGVDKEHVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYIDSDGNWHRASKGAPEQIIALCNLREDAKKRCHAIIDKFADRGLRSLAVARQEVPERTKESAGGPWQFVGLLPLFDPPRHDSAETIRQALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQDKDASIAALPVEELIEKADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLQEIFATGTVLGSYLALMTVIFFWAMKETSFFPEKFGVRHLSHDEMMSALYLQVSIVSQALIFVTRSRSWSFVERPGLLLVSAFIIAQLIATIIAVYADWGFAKVKGIGWGWAGVIWLYSVVFYIPLDFMKFAIRYILSGKAWVNLLENKTAFTTKKDYGKEEREAQWALAQRTLHGLQPPDTSGIFNEKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1919 949 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 101 348 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1919 949 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 563 676 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1919 949 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Ahy1g1919 949 SFLD p-type atpase 311 640 IPR044492 -
Ahy1g1919 949 PANTHER CALCIUM-TRANSPORTING ATPASE 3 929 - -
Ahy1g1919 949 SUPERFAMILY HAD-like 325 635 IPR036412 -
Ahy1g1919 949 Gene3D - 326 625 IPR023214 -
Ahy1g1919 949 Gene3D - 898 949 - -
Ahy1g1919 949 PANTHER PLASMA MEMBRANE ATPASE 3 929 - -
Ahy1g1919 949 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 34 804 IPR006534 GO:0008553|GO:0016021|GO:0120029
Ahy1g1919 949 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Ahy1g1919 949 Gene3D - 132 216 - -
Ahy1g1919 949 Pfam haloacid dehalogenase-like hydrolase 325 602 - -
Ahy1g1919 949 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Ahy1g1919 949 SFLD C1.7: P-type atpase like 311 640 - -
Ahy1g1919 949 Coils Coil 900 920 - -
Ahy1g1919 949 PRINTS H+-transporting ATPase (proton pump) signature 588 604 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1919 949 PRINTS H+-transporting ATPase (proton pump) signature 758 779 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1919 949 PRINTS H+-transporting ATPase (proton pump) signature 560 576 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1919 949 PRINTS H+-transporting ATPase (proton pump) signature 619 644 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1919 949 PRINTS H+-transporting ATPase (proton pump) signature 445 463 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1919 949 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Ahy1g1919 949 Gene3D - 341 488 IPR023299 GO:0000166
Ahy1g1919 949 SUPERFAMILY Calcium ATPase, transmembrane domain M 15 845 IPR023298 -
Ahy1g1919 949 CDD P-type_ATPase_H 34 839 IPR006534 GO:0008553|GO:0016021|GO:0120029
Ahy1g1919 949 Gene3D - 94 813 - -
Ahy1g1919 949 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Ahy1g1919 949 PRINTS P-type cation-transporting ATPase superfamily signature 505 515 - -
Ahy1g1919 949 PRINTS P-type cation-transporting ATPase superfamily signature 588 607 - -
Ahy1g1919 949 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Ahy1g1919 949 PRINTS P-type cation-transporting ATPase superfamily signature 483 494 - -
Ahy1g1919 949 PRINTS P-type cation-transporting ATPase superfamily signature 611 623 - -
Ahy1g1919 949 Pfam E1-E2 ATPase 131 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1919 Ahy-Chr1 95897647 95903517 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1919 5 949 Primary Pumps ATPases AT4G30190 83.776 0.0 1628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1919 K01535 - gmx:100816905 1745.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3054 11 148167086 148172956 Ahy1g1919 1 95897647 95903517 hybridization
Ahy1g1919 1 95897647 95903517 Ahy14g1221 14 26070128 26078503 PCT
Ahy1g1919 1 95897647 95903517 Ahy4g1127 4 28054890 28063542 PCT
Ahy14g1221 14 26070128 26078503 Ahy1g1919 1 95897647 95903517 PCT
Ahy4g1127 4 28054890 28063542 Ahy1g1919 1 95897647 95903517 PCT