Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1918 ATGGAGGGAAATGCAGGAGGTAATAAACGCAGACGTGTTTATTCTGTGGAAGCAAAGAAAGTAGCACAATCTGCATTCACCAGAAACTATGTCAACTATCTTATTCCAGCGTTGACCAAGATCAAGAACCAGAACACCACCACCACTTCCTCTGATTTCAAGAATGTTAAGTATGAAGTGGACATGGCTATGGCCTTCTCAGCTGAAGGTTTTGCATGGAGCCATGGTCTGAAACTCAAGCTTCTTCAAAGAGATGAAGACGAAGCACCTACCATCACTACTGAAAAGGCTTCTTCAAACCCTAGTTTAAAGACATCATCAGATGAAGATGAGAAGATGAAGAGTGAGTTGAGTAGCCTGAGAAAGCTGATACCAGGAGGAGAAGAGATTGTTGATGAAGAAATGGTTACAGAATTAGAGAGTTATATAAGCTGTTTGGAGATGCAGGTCAATGTTCTTCAATGCCTGCTTTCTCTCTCATAG 483 0.4161 MEGNAGGNKRRRVYSVEAKKVAQSAFTRNYVNYLIPALTKIKNQNTTTTSSDFKNVKYEVDMAMAFSAEGFAWSHGLKLKLLQRDEDEAPTITTEKASSNPSLKTSSDEDEKMKSELSSLRKLIPGGEEIVDEEMVTELESYISCLEMQVNVLQCLLSLS* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1918 160 PANTHER TRANSCRIPTION FACTOR BHLH146 8 96 - -
Ahy1g1918 160 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 93 158 IPR044660 GO:0006355
Ahy1g1918 160 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 8 96 IPR044660 GO:0006355
Ahy1g1918 160 PANTHER TRANSCRIPTION FACTOR BHLH146 93 158 - -
Ahy1g1918 160 CDD bHLH_AtIBH1_like 102 157 IPR044549 GO:0006355
Ahy1g1918 160 MobiDBLite consensus disorder prediction 88 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1918 Ahy-Chr1 95885752 95886565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1918 8 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 37.908 9.06e-26 94.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1918 - - adu:107461270 313.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3055 11 148184825 148185574 Ahy1g1918 1 95885752 95886565 hybridization
Ahy1g1918 1 95885752 95886565 Ahy14g1225 14 26198559 26199567 PCT
Ahy14g1225 14 26198559 26199567 Ahy1g1918 1 95885752 95886565 PCT