Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1911 ATGGCACTAACGTTAAAAGGGTGTTGCATGGTGAGGCCTAATGAGGCAACATGGTGTGGTCGCTTACCATTATCCGAATGGGACCAAATAGGAACCATAACACATGTTCCCACCATCTACTTCTATCATAAACCCACAAGCTTACACACTTCCACCATTATTAACACTTTGAAGGACTCTTTGAGTCGTGTGCTTGTACCATTTTACCCCTTGGCCGGTCGGTTACACTGGATAAATAACGGTCGTCTTGAGCTCGAATGCAACGCCATGGGAGCTCAATTCATTGAAGCCGAATCGTCATCAACCCTAGAAGAGGTTGGTGACTTGTCGCTTTCATCGGAGTATCTCTACCACCTTTCTCCAAACGTAGACTATACTCTCCCAATTCATGAGTTGCCGCTGTTCATTGTTCAATTCACGACGTTCAAGTGTGGCGGATTCGGCCTCAGCTTGGCGATTTCTCATGCCATTGCCGACGGACAAAGTGCACTGCATTTTATCAACGAGTGGTCGAGGTTTGCGCGCGGTGAGGCCTTGGAGATGGTGCCGTTTCTTGATAGGAAAGTGTTGCGGGCCGGAGAACCACCTTTGGCGCCGTTGCCGGCTGGCCATGGGCGGTCGGAGTTCGAAAATCCTCCGTTGTTGCTGGGGCAGTCTACGAATATGGAGCAGAGGAAAAAGAAAACGACGGTGGAGTTTTTCAAGTTGAGCAAACAAGAAGTTGATGGGTTAAGGAATTTGGCAAATCTTAGTTGGGGTAACCCTAGCAATGGACGTGGTTATACCAGGTACGAAACAGTAGCGGGGCACGTGTGGAGAAGCGCATGCAAGGCAAGGGAACACAAAAATGACCAACCAACGTGTTTAGGGGTGTGTGTGGATTCAAGGTGTCGCATGAAGCCGCCATTGCCAAAAGGGTACTTCGGGAACGCAACCTTGGACGTGGTTGCAACCTCTCTTTCCGGTGATTTGGTTTCAAGGCCATTAGGGTATGCTTCAAGCAGAATAAGGGAAGCCATTGAGAAGGTGACTGATGAGTACATCAAGTCAGAGATTGAGTTCTTGAAGAACCAACAGGATTTGAGCAGGTTTCAGGATCTTCATGCCATGAGAAGTGACAAGGGTCCATTCTATGGTAACCCTAACATGGGTGTGGTTAGTTGGTTGACTTTGCCGGTCAACGGCCTTGACTTTGGATGGGGTAAAGAGGTTCAAATGTATCCCGGTACACATGAATTTGATGGTGATTCTGTTCTTCTTCCTGGTCTTGATACTGATGGTTCTGTTGTTCTTGCTATATGTTTGCAAGTGGATCATATGGATGCATTTAGGAAGCATTTCTATCAAGAGGAATCATGCTAA 1362 0.4743 MALTLKGCCMVRPNEATWCGRLPLSEWDQIGTITHVPTIYFYHKPTSLHTSTIINTLKDSLSRVLVPFYPLAGRLHWINNGRLELECNAMGAQFIEAESSSTLEEVGDLSLSSEYLYHLSPNVDYTLPIHELPLFIVQFTTFKCGGFGLSLAISHAIADGQSALHFINEWSRFARGEALEMVPFLDRKVLRAGEPPLAPLPAGHGRSEFENPPLLLGQSTNMEQRKKKTTVEFFKLSKQEVDGLRNLANLSWGNPSNGRGYTRYETVAGHVWRSACKAREHKNDQPTCLGVCVDSRCRMKPPLPKGYFGNATLDVVATSLSGDLVSRPLGYASSRIREAIEKVTDEYIKSEIEFLKNQQDLSRFQDLHAMRSDKGPFYGNPNMGVVSWLTLPVNGLDFGWGKEVQMYPGTHEFDGDSVLLPGLDTDGSVVLAICLQVDHMDAFRKHFYQEESC* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1911 453 Gene3D - 1 204 IPR023213 -
Ahy1g1911 453 Pfam Transferase family 3 449 - -
Ahy1g1911 453 Gene3D - 218 450 IPR023213 -
Ahy1g1911 453 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 450 - -
Ahy1g1911 453 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1911 Ahy-Chr1 95785985 95788836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1911 1 449 Monolignol Biosynthesis Gene Families AT5G48930 38.222 4.94e-105 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1911 K13065 - gmx:100777007 630.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3061 11 148241126 148243648 Ahy1g1911 1 95785985 95788836 hybridization