Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1892 ATGTCATCATCGTGTTTAAGTGGAGCTGGCGGAAGAACCTATGGCTTCGAATTCGAATTCGTTAAGTCAACATCTTCATCAATCACCAGAACTTCACACACTTCATCATCACCGTCTTCAACAATCTCCGAATCCAGCAACAGCCAGCTGGCAATCTCCACGCGTAAGCCCAGAACCGCTCGCAAGCGACCCAATCAAACCTACAACGAAGCCGCGGCGCTTCTCTCCACCGCATACCCCAACCTCTTCTCATCCAACACCCTCAAAAGCTTCGCCAAACCATCGCCGCAATACAGTAACGGTAATATTTCCAATACGGCGTCGTTTTTGGACGACTCGTCGGACCTGTTGTTGCCGTTCAGGGTGTTCGATACGTCGTCGTTTCTGCTCCACCAGTACAAGCCGTCGTGCTTCGCGGTGGAGCCTAAGGTGGTGAGTGTGCAGCACGAGAAGCCATGCCAGAGCCCAGGGGAGATAAGCTCCAGGGTGAATTCCTTGGAATTGGAGGACCATAACAATAACCATTGCTGCGCCGGAGAAGACGATTTCGATGCCGAATCGATGCTCGACGAGGAAATCGAGGAGGGAATTGATAGCATCATGGGGAGCGGGGTAGAATTGGAATCGTCCTCCATTGATGGAGCTTCTTCGGATAATAATCCGTGGAGTTGTTTTGGCGGGAAACTGGATTTCCGGCTAGGGTTGCGGAGGGCCGGAGTGAGGGCTCTCCGAAGCGCCGACGACGGCAATTGGTGGAATTTCCCGGCGGTTGATATCCTTCAGATATCGCCTAAGGCCGTAAACAAGCCTGCGCCGCAACAACCGGTGGCTGCGGCAGCTGAAAAGGCGAAGAAGAAGAAGAAGAAGGTGGAGAAACCGAGCGTTGAGGTGAAGAATAAGAGCGATGAATTTCCGAAGCTGAATAATATTCATGCCGCTGTTCCGAAATTGAATTCCGGATTGATGTTGAAATTGAATTACGACGGTGTCAGGGATAGTTGGTCCGACAGGGGCTCGCCGTTCGGCGACGACGGCTCAGCCTCCGACTTGCCGGGAAGTGACGTCACCGCACGATTGTCACAAATCGATTTGTTATGGGAGAATGGGGGAATGAGAGAGGCTAGCGTGCTTCGCTACAAAGAAAAGCGGCGTACACGCCTCTTCTCGAAGAAGATCAGGTACCAAGTCAGGAAGGTCAACGCAGATCGACGGCCCAGAATGCAGGAAAAAAAAATTCTTTAA 1242 0.5193 MSSSCLSGAGGRTYGFEFEFVKSTSSSITRTSHTSSSPSSTISESSNSQLAISTRKPRTARKRPNQTYNEAAALLSTAYPNLFSSNTLKSFAKPSPQYSNGNISNTASFLDDSSDLLLPFRVFDTSSFLLHQYKPSCFAVEPKVVSVQHEKPCQSPGEISSRVNSLELEDHNNNHCCAGEDDFDAESMLDEEIEEGIDSIMGSGVELESSSIDGASSDNNPWSCFGGKLDFRLGLRRAGVRALRSADDGNWWNFPAVDILQISPKAVNKPAPQQPVAAAAEKAKKKKKKVEKPSVEVKNKSDEFPKLNNIHAAVPKLNSGLMLKLNYDGVRDSWSDRGSPFGDDGSASDLPGSDVTARLSQIDLLWENGGMREASVLRYKEKRRTRLFSKKIRYQVRKVNADRRPRMQEKKIL* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1892 413 ProSiteProfiles CCT domain profile. 372 413 IPR010402 GO:0005515
Ahy1g1892 413 MobiDBLite consensus disorder prediction 28 65 - -
Ahy1g1892 413 MobiDBLite consensus disorder prediction 28 55 - -
Ahy1g1892 413 Pfam CCT motif 372 407 IPR010402 GO:0005515
Ahy1g1892 413 PANTHER OS02G0148000 PROTEIN 1 408 - -
Ahy1g1892 413 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1892 Ahy-Chr1 95497916 95502013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1892 321 408 C2C2-CO-like Transcription Factor Family AT1G25440 43.119 2.66e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy1g1892 CCT 1.20E-12 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1892 - - adu:107496352 711.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3078 11 148401567 148404751 Ahy1g1892 1 95497916 95502013 hybridization