Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1880 ATGGAGAATAATGATAATACCACTATGAACGAATACGATAGAGTAACATACAGTGTCATCTCTCCTGCGACAGTTATTGGAAGAAGCATGAGTTATGGAAAGGACGACATAGAAGCTCCTCGGAGCTCCGGTGACATCGACGACGGAGGCTCCTCCTCCAGTCCCTTTGATATTGCCAGAACAAAAGATGCTTCCGTTCAACGACTCAAGCGTTGGAGGCAAGCAGCGCTTGTGCTTAACGCTTCTCGCCGATTTCGCTACACCTTGGACCTGAAGAAAGAAGAAGAAAAGGAGCAAGTGCTGAGAAAGATTAGAGGGCATGTTCAAGTCATCAGAGCAGCGTATCTTTTCAAGGAGTCTGCAAAAAAATTGAATAGTGGAATCGCCCCACATCCTACAAGCACCACTGGAGAATTTCAAATTGGGCTAGAGTTACTTTCTTCAATTGCAAGGGATCATAATACTGCTACTCTGCAAGAAAAAGGAGGGGTTGAAGGGATAGCAAGTTTGTTGGAGACCAATTTAGAAAAGGGGATTCAAGGTGATGACACTGACTTGTCAAGACGGACAAAGGCTTTTGGCTCGAACAACTATCCTCGAAAGAAAGGAAGAAGTTTCTTGATGTTTGTTTGGGATGCTTGCAAGGATCTGACCTTGATTATTTTAATGGTAGCTGCTGCAGCTTCATTAGTACTGGGGATAAAATCTGAGGGTATTAAGGAAGGATGGTATGATGGTGGAAGCATTGCTTTTGCAGTTATTCTTGTTATTGTTGTTACAGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGGGACCTAAATGAGGAGAAGAGAAACATTCGTTTGGAGGTAATTAGAGGAGGTAGAAGAGTTGAGATCTCAATCTATGATATTGTTGTTGGTGATGTCATACCCCTTAACATTGGTGACCAGGTCCCTGCTGATGGAATTTTGATCGTCGGTCACTCTCTTGCAGTTGATGAATCTAGTATGACTGGGGAGAGCAATATTGTTGAAAAGAATTCTAAGAACCCTATTCTGATATCTGGTTGTAAAGTTGCAGATGGCAATGGTCTTATGCTCGTAACGGCTGTTGGTATTAATACCGAATGGGGGCTTCTAATGGCTAACATTTCAGAAGACAATGGTGAAGAAACACCTTTGCAGGTACGCTTGAATGGTCTTGCCACCTTCATAGGTATAATTGGGCTCTCTGTGGCTGTCATCGTTCTGGTTGTGCTACTGGCCAGGTATTTCTCTGGGCATTCTAGAAACCCAGATGGAAGTGTTCAATTTACAGCTGGCAAGACTAAACTCAGTACTGCAATTGATGGAGCAATAAAGATAGTCACTGTTGCGGTCACTATTGTAGTGGTTGCAGTACCTGAAGGACTCCCTTTAGCAGTTACCTTAACACTTGCCTACTCTATGAGAAAAATGATGGCAGATAAAGCTTTGGTACGTAGGCTTTCTGCCTGTGAGACTATGGGCTCAGCCACAACTATTTGCAGTGATAAGACTGGAACATTGACTATGAATCAGATGACTGTGGTTGAGGCTATCATTGGTGGGGAGAACATTGATCCTCCTCACGAGAAGTCAAAGCTCAAACCTATACTCTGCTCGTTGCTGATTGAAGGAGTTGCACAGAACACCAATGGCAGTGTTTTTGTACCTGAGGGTAGTAACAATGTTGAGGTTTCTGGATCACCAACAGAGAAGGCAATTTTACATTGGGCTGTTCAGCTTGGGATGAATTTTAAAGCCGCTAGAGCAGAATCATCAATTATTCATGTCTTCCCATTCAATTCAGATAAAAAACGAGGCGGGGTTGCAGTACAGACGACTGAATCTGAAATCCATATACATTGGAAAGGGGCTGCTGAGATAGTCCTAGGCTGCTGTACACAGTATATGGATGTAAATGATCACTTAATAGAGATGGATGAAGGAAAGATGAACTATTTTAGAAGAGCTATTGAAGATATGGCTTCTCGTAGTCTACGGTGTGTTGCCATTGCGTATAGATTATATGAAATGGAGAAAGTTCCAACCAGTGAAGACCTTGCTCACTGGTCATTACCTGAGGATAATCTCATCTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGTGTGAAAGATGCGGTGAAACTTTGCCAGAAAGCTGGAGTTAAGGTAAAAATGGTCACCGGTGACAATGTCAAAACTGCAACAGCAATTGCCGTGGAATGTGGAATACTTAATTCATATTCCGAAGCTACAGAGCCATATGTCATCATTGAAGGAAAAGACTTCCGTGCGATGCAAGATGCAGAGAGATTAGAAATTGTTGAAAAGATATCAGTTATGGGACGATCGTCTCCGAATGACAAGCTTTTGCTCGTGCAAGCACTGAGGAGGAAGGAGCATGTTGTTGCTGTAACTGGAGACGGAACTAATGATGCTCCTGCCTTACATGAGGCTGATATAGGTCTTGCAATGGGGATTCAAGGTACAGAAGTTGCGAAAGAGAGCTCTGATATCATTATATTGGATGACAATTTTGCTTCAGTTGTAAAGGTTGTCAGGTGGGGGAGGTCTGTGTATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTGAATATAGCAGCTCTTGTTATAAATGTTATTGCTGCATTTTCTTCCGGTGACGTACCACTAAATACAGTACAGCTTCTGTGGGTAAATCTTATCATGGATACACTTGGAGCTCTAGCCTTGGCAACTGAACCACCAACTGATCATCTAATGGATCGTGATCCAATGGGTCGAAGAGAACCTCTTATATCAAATATTATGTGGAGGAATCTGCTGATACAGGCAATTTACCAAGTGTCTGTCCTACTTATACTCAATTTCCGAGGCATTTCCATACTGAATTTGGCACACAAGTCCAGTGACCACGCACTCAAAGTGAAGGACACTTTGATATTCAATGCCTTTGTTCTCTGTCAAGTTTTTAATGAATTTAATGCCCGCAAGCCGGATGAGTTCAATATATTCAAGGGAGTCACAAGAAACTACCTCTTTATGGGGATAGTGGCATTAACTGTAGTACTTCAGATCATCATCATTGAATTTCTAGAAAAGTTCGTTAAAACAGTCAAGCTAACTTGGCAACAGTGGCTCATTTGTGTCATCATTGGATTTATCAGCTGGCCTCTTGCTGTGGTTGGAAAACTGATACCAGTACCAGAAAAGCAGCTCAGTAACTCTTTTAGGAAGTGTACTAACCGTGTTCGAAGGTGTTTTTGTCGACCAGAAAAACTGTGA 3309 0.4219 MENNDNTTMNEYDRVTYSVISPATVIGRSMSYGKDDIEAPRSSGDIDDGGSSSSPFDIARTKDASVQRLKRWRQAALVLNASRRFRYTLDLKKEEEKEQVLRKIRGHVQVIRAAYLFKESAKKLNSGIAPHPTSTTGEFQIGLELLSSIARDHNTATLQEKGGVEGIASLLETNLEKGIQGDDTDLSRRTKAFGSNNYPRKKGRSFLMFVWDACKDLTLIILMVAAAASLVLGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIRLEVIRGGRRVEISIYDIVVGDVIPLNIGDQVPADGILIVGHSLAVDESSMTGESNIVEKNSKNPILISGCKVADGNGLMLVTAVGINTEWGLLMANISEDNGEETPLQVRLNGLATFIGIIGLSVAVIVLVVLLARYFSGHSRNPDGSVQFTAGKTKLSTAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEAIIGGENIDPPHEKSKLKPILCSLLIEGVAQNTNGSVFVPEGSNNVEVSGSPTEKAILHWAVQLGMNFKAARAESSIIHVFPFNSDKKRGGVAVQTTESEIHIHWKGAAEIVLGCCTQYMDVNDHLIEMDEGKMNYFRRAIEDMASRSLRCVAIAYRLYEMEKVPTSEDLAHWSLPEDNLILLAIVGLKDPCRPGVKDAVKLCQKAGVKVKMVTGDNVKTATAIAVECGILNSYSEATEPYVIIEGKDFRAMQDAERLEIVEKISVMGRSSPNDKLLLVQALRRKEHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNIAALVINVIAAFSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDRDPMGRREPLISNIMWRNLLIQAIYQVSVLLILNFRGISILNLAHKSSDHALKVKDTLIFNAFVLCQVFNEFNARKPDEFNIFKGVTRNYLFMGIVALTVVLQIIIIEFLEKFVKTVKLTWQQWLICVIIGFISWPLAVVGKLIPVPEKQLSNSFRKCTNRVRRCFCRPEKL* 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1880 1102 Gene3D - 212 1065 - -
Ahy1g1880 1102 SMART Cation_ATPase_N_a_2 158 234 IPR004014 -
Ahy1g1880 1102 PANTHER CALCIUM-TRANSPORTING ATPASE 42 1091 - -
Ahy1g1880 1102 SUPERFAMILY Calcium ATPase, transduction domain A 282 376 IPR008250 -
Ahy1g1880 1102 Gene3D - 184 380 - -
Ahy1g1880 1102 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 153 1076 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Ahy1g1880 1102 Gene3D - 64 119 - -
Ahy1g1880 1102 SUPERFAMILY Calcium ATPase, transmembrane domain M 161 1075 IPR023298 -
Ahy1g1880 1102 Pfam haloacid dehalogenase-like hydrolase 501 826 - -
Ahy1g1880 1102 PANTHER CATION TRANSPORTING ATPASE 42 1091 - -
Ahy1g1880 1102 Pfam Ca2+-ATPase N terminal autoinhibitory domain 54 96 IPR024750 GO:0005516
Ahy1g1880 1102 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 511 708 IPR023299 GO:0000166
Ahy1g1880 1102 SFLD p-type atpase 486 864 IPR044492 -
Ahy1g1880 1102 CDD P-type_ATPase_Ca_PMCA-like 186 945 - -
Ahy1g1880 1102 PRINTS P-type cation-transporting ATPase superfamily signature 704 715 - -
Ahy1g1880 1102 PRINTS P-type cation-transporting ATPase superfamily signature 836 848 - -
Ahy1g1880 1102 PRINTS P-type cation-transporting ATPase superfamily signature 328 342 - -
Ahy1g1880 1102 PRINTS P-type cation-transporting ATPase superfamily signature 504 518 - -
Ahy1g1880 1102 PRINTS P-type cation-transporting ATPase superfamily signature 726 736 - -
Ahy1g1880 1102 PRINTS P-type cation-transporting ATPase superfamily signature 812 831 - -
Ahy1g1880 1102 Pfam E1-E2 ATPase 282 482 - -
Ahy1g1880 1102 ProSitePatterns E1-E2 ATPases phosphorylation site. 506 512 IPR018303 -
Ahy1g1880 1102 Gene3D - 514 711 IPR023299 GO:0000166
Ahy1g1880 1102 SFLD Haloacid Dehalogenase 486 864 - -
Ahy1g1880 1102 MobiDBLite consensus disorder prediction 31 59 - -
Ahy1g1880 1102 Pfam Cation transporting ATPase, C-terminus 897 1074 IPR006068 -
Ahy1g1880 1102 Gene3D - 501 857 IPR023214 -
Ahy1g1880 1102 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 249 418 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1880 1102 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 779 892 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1880 1102 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 444 536 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Ahy1g1880 1102 SUPERFAMILY HAD-like 502 917 IPR036412 -
Ahy1g1880 1102 PRINTS Sodium/potassium-transporting ATPase signature 497 518 - -
Ahy1g1880 1102 PRINTS Sodium/potassium-transporting ATPase signature 247 267 - -
Ahy1g1880 1102 PRINTS Sodium/potassium-transporting ATPase signature 623 641 - -
Ahy1g1880 1102 PRINTS Sodium/potassium-transporting ATPase signature 884 905 - -
Ahy1g1880 1102 Pfam Cation transporter/ATPase, N-terminus 161 229 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1880 Ahy-Chr1 95358754 95372533 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1880 39 1094 Primary Pumps ATPases AT4G29900 71.617 0.0 1540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1880 K01537 - gmx:100820121 1652.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3090 11 148557602 148571728 Ahy1g1880 1 95358754 95372533 hybridization
Ahy1g1880 1 95358754 95372533 Ahy13g2143 13 40673272 40690058 PCT
Ahy1g1880 1 95358754 95372533 Ahy3g1847 3 38659029 38679932 PCT
Ahy13g2143 13 40673272 40690058 Ahy1g1880 1 95358754 95372533 PCT
Ahy3g1847 3 38659029 38679932 Ahy1g1880 1 95358754 95372533 PCT