Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1876 ATGGAGTCACAGATAGCCATACAAGAAGCTGCTTCCGCTGGTTTGAAGAGCATGGAGCATCTCATCCGACTTCTCTCTTCACAATCCCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCACTACCGCATCGATCTCAATAACCGTGACTGCACAGAAATCACCGACTTCACAGTTTCAAAGTTCAAACAGGTTATTAACTTGTTGAATCGCACCGGTCATGCTCGCTTCCGTCGCGCACCTTCTCAGCTTGACGACGACAAATTCAACCATGTCCAATCAAAAGTCGTAGTGCCACCTCCTCCTCCTCCTCCTCCTCCTCAGGGTTTGACTCTAGATTTTGCTAAGCCCGTTCAGGTCAACAAGCCATCAATTAATAATAATAAGGATACATCATGTAGCACGTCGCTTTCTCCTCCCATGTCCACCACCACCTCCTCCTTCATGTCCACCATCACCGGAGATGGCAGCGTCTCCGACGGTAAGATAGGTCCTTCCATTATCGCCGCTGGGAAGCCTCCCCTCTCCTCATCTCACCGTAAAAGGTGTCACGACGCCACCCTTTCGTCGGGAAAAGCCACATCCTCCTCCTCCTCCCAGTGTCATTGCTCCAAGAGAAGGAAATCCCGTGTGAAACGAGTGGTTCGAATGGCGGCAATAAGCTCAAGGATTGCAGATATCCCAGGCGACGAATACTCATGGAGAAAATACGGTCAAAAACCTATCAAGGGATCACCCTACCCTCGTTACTACAAGTGCAGTAGCGTGAGAGGGTGTCCAGCCAGGAAGCACGTGGAGAGAGCACAAGACGACCCCAACACGCTCATCGTTACTTACGAGGGTGACCACCGCCACACCCAAACACAACCACAACCCGTTGGATTTTCCCCTCACCATCTTTCATCAACGGCACTCACGCGTGCCACCTGA 927 0.5081 MESQIAIQEAASAGLKSMEHLIRLLSSQSPSSSSSSSSSHYRIDLNNRDCTEITDFTVSKFKQVINLLNRTGHARFRRAPSQLDDDKFNHVQSKVVVPPPPPPPPPQGLTLDFAKPVQVNKPSINNNKDTSCSTSLSPPMSTTTSSFMSTITGDGSVSDGKIGPSIIAAGKPPLSSSHRKRCHDATLSSGKATSSSSSQCHCSKRRKSRVKRVVRMAAISSRIADIPGDEYSWRKYGQKPIKGSPYPRYYKCSSVRGCPARKHVERAQDDPNTLIVTYEGDHRHTQTQPQPVGFSPHHLSSTALTRAT* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1876 308 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 287 - -
Ahy1g1876 308 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 1 287 IPR044810 GO:0003700
Ahy1g1876 308 SMART WRKY_cls 227 286 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy1g1876 308 MobiDBLite consensus disorder prediction 121 145 - -
Ahy1g1876 308 ProSiteProfiles WRKY domain profile. 222 287 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy1g1876 308 MobiDBLite consensus disorder prediction 169 207 - -
Ahy1g1876 308 Pfam WRKY DNA -binding domain 229 284 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy1g1876 308 Gene3D WRKY domain 213 287 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy1g1876 308 SUPERFAMILY WRKY DNA-binding domain 225 286 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy1g1876 308 MobiDBLite consensus disorder prediction 187 201 - -
Ahy1g1876 308 MobiDBLite consensus disorder prediction 282 308 - -
Ahy1g1876 308 Pfam Plant zinc cluster domain 179 225 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1876 Ahy-Chr1 95309450 95311005 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1876 1 290 WRKY Transcription Factor Family AT2G24570 51.582 9.14e-87 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy1g1876 WRKY 7.00E-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1876 - - gmx:732587 357.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3094 11 148590356 148592012 Ahy1g1876 1 95309450 95311005 hybridization
Ahy1g1876 1 95309450 95311005 Ahy13g2162 13 41114501 41116176 PCT
Ahy1g1876 1 95309450 95311005 Ahy3g1855 3 39161855 39163535 PCT
Ahy13g2162 13 41114501 41116176 Ahy1g1876 1 95309450 95311005 PCT
Ahy3g1855 3 39161855 39163535 Ahy1g1876 1 95309450 95311005 PCT