Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1871 ATGGAAGTGAGACTGAGAAGTGTTGTAACTTACAATAATCCAGAATCCTCTATGGGAGCTCAGAACTCATCATGGTCCCATCACACTTCAGGAGCATTGTTTTTCTTCCTTGGAGGGATAATAGTGCTTATCATATTGCTCATTCTTCTCTTTGTCTATTGGATGGTTATTAAACGGAGATCACCACAAGAGGCAGAGGAGAAAATGGAAAAGAAACCTTCAATAATGAGTCAACACCATGCAGATGAGGTGGTGAAGGTAACATTTTCAAGCAAACAACAGCCAGGATCAATGGACTTCTTTAGTGGGAGCCTTGGGACAATTAGTCACTTCAACCTGAACACATTGAGAAGGGCAACCAGGAATTTTCATAGCAAAAATCTTCTTGGAAGTGGTGGTTTTGGCCCTGTTTATCAGGGAAAGTTGGCAGATGGAAGGCTAGTTGCTGTTAAGCAATTGTCTGCTGAGAAATCCCAACAAGGAGAAAAAGAGTTCTTGGCAGAGGTGAGATTAATCACAAGCATCCAACACAAGAATCTTGTTCGCCTTCTTGGTTGTTGTACTGATGGATCTCAAAGGATTCTTGTCTATGAATACATGAAGAACAAAAGTTTGGACCGCATCCTATATGGAAAAAGTGACCAATTCCTGGATTGGAGCACTAGATTCCAAATTATTCTTGGAGTGGCACGGGGATTGCAATATCTACATGAGGATTCGCATTTGAGAATTGTTCACAGAGATATCAAAGCAAGCAACATTCTTCTTGATGAAAAGTTTCAGCCAAAGATTGGAGACTTTGGGCTAGCTAGATTCTTTCCAGAAGATCAAGCTTACCTTAGCACTCAATTTGCTGGAACATTAGGTTATACGGCTCCTGAATATGCTATTAGAGGAGAACTATCAGAAAAGGCCGATATCTACAGTTTTGGAGTTCTTGTACTTGAAATTATAAGTTGCAGAAAGAATACAGATCTTACTTTACCATCAGAAATGCAATACCTTCCTGAATATGCATGGAAGCTTTATGAGAAGTCAATGGTGATGGGACTGGTGGATCCAAAGCTAAGGGAACATGGATTGGTGGAGAAGGATGTGATGAGAGCATTCCACGTGGCATTCTTGTGCCTACAGCCTCATGCAGGTCTGAGACCAGCCATGTCAGAGATCGTGGCACTGTTGACATTCAAAGTTGAAATGGTGTCAACACCAATGAGGCCATCGTTCTTTGATCGGAGACCCAAGAAGCACGATGAGGACATGCCCTCTTGGGAAGCCATATCAGACACTTTCTCAGTTCCAATCATAACTGATTCTAATCTTCCAACATCTGAAGATCGCTGA 1344 0.4174 MEVRLRSVVTYNNPESSMGAQNSSWSHHTSGALFFFLGGIIVLIILLILLFVYWMVIKRRSPQEAEEKMEKKPSIMSQHHADEVVKVTFSSKQQPGSMDFFSGSLGTISHFNLNTLRRATRNFHSKNLLGSGGFGPVYQGKLADGRLVAVKQLSAEKSQQGEKEFLAEVRLITSIQHKNLVRLLGCCTDGSQRILVYEYMKNKSLDRILYGKSDQFLDWSTRFQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDEKFQPKIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYEKSMVMGLVDPKLREHGLVEKDVMRAFHVAFLCLQPHAGLRPAMSEIVALLTFKVEMVSTPMRPSFFDRRPKKHDEDMPSWEAISDTFSVPIITDSNLPTSEDR* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1871 447 Gene3D Phosphorylase Kinase; domain 1 97 199 - -
Ahy1g1871 447 CDD STKc_IRAK 129 395 - -
Ahy1g1871 447 ProSiteProfiles Protein kinase domain profile. 123 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1871 447 Gene3D Transferase(Phosphotransferase) domain 1 200 403 - -
Ahy1g1871 447 SUPERFAMILY Protein kinase-like (PK-like) 102 397 IPR011009 -
Ahy1g1871 447 Pfam Protein tyrosine and serine/threonine kinase 125 335 IPR001245 GO:0004672|GO:0006468
Ahy1g1871 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 244 256 IPR008271 GO:0004672|GO:0006468
Ahy1g1871 447 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 102 409 - -
Ahy1g1871 447 SMART serkin_6 123 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1871 447 PANTHER RECEPTOR-LIKE KINASE 102 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1871 Ahy-Chr1 95269589 95272422 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1871 111 410 Receptor kinase-like Gene Family AT1G56120 50.667 3.56e-101 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Ahy1g1871 PK_Tyr_Ser-Thr 1.40E-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1871 - - ccaj:109792436 619.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3100 11 148636447 148639346 Ahy1g1871 1 95269589 95272422 hybridization
Ahy1g1871 1 95269589 95272422 Ahy13g2173 13 41681752 41685021 PCT
Ahy1g1871 1 95269589 95272422 Ahy3g1865 3 39705979 39709570 PCT
Ahy13g2173 13 41681752 41685021 Ahy1g1871 1 95269589 95272422 PCT
Ahy3g1865 3 39705979 39709570 Ahy1g1871 1 95269589 95272422 PCT