Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1862 ATGATCCGTCACTGCAAATTGCTCTCTTCCATTACAAATCTTTGCAAACTCACCCACAATCTCTCTGGCTCTCGCTCCTTCATTTGCCCGGGTTCTGAGAATGGTGACACTGTGAACTATGCAACTGTGGTCAGGGAAGTGAAAGCATATTTGAAGAAAGGTGTTGCAGCGAAGGAATTGCAGTCACATATTGCTGCATTTCCTGTATCTGCTCAGGAGAAGATGAATGCACTTCTTGAAGGATTATTTGATGGCGTCGAAAAAGTGTTTGGAAAAGAAGCTACCAAGAGGAAGAATCACCTTGCTGGTGCAGTTGCTGGAGATGACGAGGGATCGCAGCTGTTATTGCTCAATGCTGCTGAGGAGTTCTGTTACAAGAAAGGTAGCAATGAGTTGAATGAGGTTGCACTTATTCCGAAAGCCCTCTATGATGTTGATTTGGTGGAGGAAGAGCACGTCATGCATTGGTATTCAAAGGGACTGAAGGGTGATAAGAAGGACTCTCAGGTATGGAAGAATGCTCAACCATTCATTGATTGGCTTCGGAATGCTGAATCAGAATCGGAGGAAGAATGA 576 0.4462 MIRHCKLLSSITNLCKLTHNLSGSRSFICPGSENGDTVNYATVVREVKAYLKKGVAAKELQSHIAAFPVSAQEKMNALLEGLFDGVEKVFGKEATKRKNHLAGAVAGDDEGSQLLLLNAAEEFCYKKGSNELNEVALIPKALYDVDLVEEEHVMHWYSKGLKGDKKDSQVWKNAQPFIDWLRNAESESEEE* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1862 191 CDD W2_eIF5 43 189 - -
Ahy1g1862 191 ProSiteProfiles W2 domain profile. 30 191 IPR003307 GO:0005515
Ahy1g1862 191 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-LIKE 30 191 - -
Ahy1g1862 191 Pfam eIF4-gamma/eIF5/eIF2-epsilon 113 191 IPR003307 GO:0005515
Ahy1g1862 191 SUPERFAMILY ARM repeat 39 185 IPR016024 -
Ahy1g1862 191 SMART 542_3 99 187 IPR003307 GO:0005515
Ahy1g1862 191 Gene3D - 37 191 - -
Ahy1g1862 191 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 30 191 IPR045196 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1862 Ahy-Chr1 95195196 95199309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1862 43 184 Eukaryotic Initiation Factors Gene Family AT1G77840 51.049 1.85e-42 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1862 K03262 - aip:107619007 315.079