Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1848 ATGAAGTTTTCAACTCCGGTGGGCGCATCGAACAACACATTGACCAATTCAACCCAAGGCGATGAAGAATTGAGTACGGGAGAAGTTGTTATTCAAGAGCAAGAGGGGTCTAAGGGCGACAAAGTTATCGACGTCATTGTGATGAGTAAGGATGAGTTGGAATTGAGACACGAGGCAAAGAAAGTGGGGTTCGTAACCAAAGTCAGGAACACGAATTTCGACAAGATGCAGAAGGAATCAAAGATACCTGTTAATCAATTTCTTCACTGCACACGAGAGGGTTATCGGGAATCTCGGGTTAAGGCAGCAACTCGGACAAACAGAATAACAGCCACGAGATGCAGAGTAAGGATGTATGTTATGCTGGACAGGGAGAAGGAATGTTGGGTTGTGTATAGGTTAGAATTGAGGCATTCTCACCCCTGTTTGGCTAAGAAAGCTGTCCGCTATCATGAGTATAGGGAGTTGACCATGCATGCTAAGTGCGTCATTACGGATAACAATGAGGCTGACATAAGACCCAACAAGACGTATCTAGTACTGTCAAACGAGGAGATCAATCCCAGCTTCTTTTATACCATAGATGTTGACGATGCTAATAAATTTAAGAGTGCACTCTGGGTAGATACAAGGCATGGTCTACCGTTTGCATCATTTGTCAGTGTAAACCACCATGAGAAGTCTACTCTTTTTGGCTGTGCTTTACTTGGGAGCGAGGAGATCCCTAATTTTGAGTGGGTGTTCACGCAGTGGGTGAGATGCATCAGGACTACGCTAAGGGGGCTCATCACTGACCAGTGCAAGGCAATGACTGGTGCTATTAGGAAGGTCCTATCCGATATTGTCCACCGATGTGCTTTGGAAGCTGTCATCATGTTTTGTCTAAGCGACACTCTTATGTTTTTTTTTTTTGGCAGACCTTATGCGAATCGATGGAAGTGGGTTCCAATATTCTTCAAGAGTGAATTTTGGGCCAGCATGAGGAGTACACAGTGGAGTGAAAGTATGCATGCATTTTACGGGGGCTTTCTGCATTGCAAGAGTAGGTTGGTTCAGTTCGTCCATGAATACGACAATGTGCTTGGAAACAAAGAGCAGAAGGAGTTGGAAGATGATGCTGCGGACTCGAAAGGAGTCATCCCATGTATAGGGAGCACAGCCATTGAGAGACAGTTTTACCAGGAATACACCAGTAATATGTTCAACCACACGGGGTCAACCATAACTACCTAG 1233 0.4493 MKFSTPVGASNNTLTNSTQGDEELSTGEVVIQEQEGSKGDKVIDVIVMSKDELELRHEAKKVGFVTKVRNTNFDKMQKESKIPVNQFLHCTREGYRESRVKAATRTNRITATRCRVRMYVMLDREKECWVVYRLELRHSHPCLAKKAVRYHEYRELTMHAKCVITDNNEADIRPNKTYLVLSNEEINPSFFYTIDVDDANKFKSALWVDTRHGLPFASFVSVNHHEKSTLFGCALLGSEEIPNFEWVFTQWVRCIRTTLRGLITDQCKAMTGAIRKVLSDIVHRCALEAVIMFCLSDTLMFFFFGRPYANRWKWVPIFFKSEFWASMRSTQWSESMHAFYGGFLHCKSRLVQFVHEYDNVLGNKEQKELEDDAADSKGVIPCIGSTAIERQFYQEYTSNMFNHTGSTITT* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1848 410 PANTHER OS03G0843700 PROTEIN 308 402 - -
Ahy1g1848 410 PANTHER OS03G0843700 PROTEIN 58 290 - -
Ahy1g1848 410 MobiDBLite consensus disorder prediction 1 25 - -
Ahy1g1848 410 Pfam MULE transposase domain 211 285 IPR018289 -
Ahy1g1848 410 Pfam FAR1 DNA-binding domain 59 143 IPR004330 -
Ahy1g1848 410 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 308 402 IPR031052 GO:0006355
Ahy1g1848 410 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 58 290 IPR031052 GO:0006355
Ahy1g1848 410 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1848 Ahy-Chr1 95094815 95097184 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g1848 FAR1 4.00E-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1848 - - adu:107458165 840.876