Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1833 ATGGTGCTGCTTGCTCACGCTGGAAGCGGTGGCGGCCAGGCTTGCTCACCGCCACAGTTCAACAAAGCTATTGCGGAAGAAAAACCAGTGGAAATGGTGAGAGTCAAATCAGAGCAAGTGACGTCTTCCTGCCGCTTCTTGCAGCAAAACGACGACGTTTCAAGCGACGAGTCTGATAAGAAGAAGAGCAACTCGGAAGTGACGGAAGAAGAAGAGCCTCGCGTCAAAGAGGAGGTTGCTGATGACGGCGCCGTTAACGTGTCGTCATCTTCGTCGTCGGTGGAGTTGCCGAAACCGATGGAAGGGCTTAACGAGGCGGGTCCGCCACCGTTTCTAAGGAAGACGTACGAGATGGTGGATGATCCGGAAACCGACCCGATTGTTTCGTGGAGCGAGAACCGCGATAGCTTCATCGTTTGGGAGTCTCACGAGTTCGCCAAAGTGCTTCTTCCAAAGTATTTCAAGCACAGCAACTTCTCCAGCTTCATTCGCCAGCTCAATACCTATGGCTTTAGGAAGGTTGATTCAGATCGTTGGGAGTTTGCAAACGAAGGATTCCAAGGAGGGAAGAAGCATTTGCTGAAGAACATAAGGAGGAGAAGCAAGTACAACAAACTGCATCAAGGAGCTTTCATCGACCCAGCTAAGCCTTGCCTTGAGGCTGAAGTTGAGAAGCTGAAGGAGGACCAAAACATACTCAAACTTGAAATTCTGAAGCTGAGACAACAGCAAGAAAGTTCCCACGTTCATATCTCAAGCGTTCAGGACCGGATTCAGAACGTCCAGACGAAGCAGTATCAGATGATATATTTCCTCACCAGAATGGCCAGAAAGCCAGCCTTTGTGGAACAGCTCCTCCAAAAGATTAAGAGGAAGAGGGAGCTCGATGGCACCGACATGCTCAAGAGGCGCAGATTGCTGGAACCAACGCCTAGTGTTGATTATAGATGCCAACAAGGTCATCAACAATTGTCTACATTGCAATCTGAACTTGATGGACTATTGTCTGAAAATGTGATGAGCACTAGCAATAAGATAGAGCAAACTGTTCCTTCTCCTCTGGAAGAGAACCTATTGGGGGAAAATAATGGTGGTGCTGATGAAGAACTTGATGTGAATGACTCAAATATTTATCTTGAGTTGGAGGATTTGATTACTAAGCCAACAGATTGGGTTGGTTCTGCATCTGCATCTGCTGGTGGCTTGGTGGGGCAAACTAGTTGA 1224 0.4804 MVLLAHAGSGGGQACSPPQFNKAIAEEKPVEMVRVKSEQVTSSCRFLQQNDDVSSDESDKKKSNSEVTEEEEPRVKEEVADDGAVNVSSSSSSVELPKPMEGLNEAGPPPFLRKTYEMVDDPETDPIVSWSENRDSFIVWESHEFAKVLLPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYNKLHQGAFIDPAKPCLEAEVEKLKEDQNILKLEILKLRQQQESSHVHISSVQDRIQNVQTKQYQMIYFLTRMARKPAFVEQLLQKIKRKRELDGTDMLKRRRLLEPTPSVDYRCQQGHQQLSTLQSELDGLLSENVMSTSNKIEQTVPSPLEENLLGENNGGADEELDVNDSNIYLELEDLITKPTDWVGSASASAGGLVGQTS* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1833 407 MobiDBLite consensus disorder prediction 39 111 - -
Ahy1g1833 407 SMART hsfneu3 107 200 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy1g1833 407 Gene3D - 104 201 IPR036388 -
Ahy1g1833 407 MobiDBLite consensus disorder prediction 1 20 - -
Ahy1g1833 407 ProSitePatterns HSF-type DNA-binding domain signature. 150 174 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy1g1833 407 SUPERFAMILY "Winged helix" DNA-binding domain 107 200 IPR036390 -
Ahy1g1833 407 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 80 388 - -
Ahy1g1833 407 PRINTS Heat shock factor (HSF) domain signature 149 161 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy1g1833 407 PRINTS Heat shock factor (HSF) domain signature 111 134 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy1g1833 407 PRINTS Heat shock factor (HSF) domain signature 162 174 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy1g1833 407 MobiDBLite consensus disorder prediction 52 81 - -
Ahy1g1833 407 Pfam HSF-type DNA-binding 111 200 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy1g1833 407 Coils Coil 216 243 - -
Ahy1g1833 407 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 80 388 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1833 Ahy-Chr1 94784209 94786865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1833 97 391 HSF AT2G26150 44.625 4.01e-85 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy1g1833 HSF_DNA-bind 7.30E-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1833 K09419 - gmx:100818430 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3127 11 148913678 148916301 Ahy1g1833 1 94784209 94786865 hybridization