Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1828 ATGAAGAGGGGATGTAGCTGTTACATTTGGGGCATGAGTATGTTGGTGTTGTTTTTGGGAGTAAGGTCCCAACTCACAACAGATTTCTATAACACAACATGCCCTAATCTTTTCAAAGTGGTAAGGAGACAGGTTCAAAATGCCCTCATGAATGAGATGAGAATGGGTGCTTCTTTGCTTCGTCTCCACTTTCATGATTGCTTTGTAAATGGTTGTGATGGATCAATATTGCTAGATGGAGGTAACGATATTGAAAAGTTAGCGGGTCCAAATTTGAATTCTGTACGAGGATTTGAAGTTATAGATACAATCAAAAGTTCTGTGGAGGCTGCATGTAGTGGAGTCATATCTTGTGCTGATATATTAGCCATAACCGCCAGAGATGCTGTTTTCCTTAGCGGTGGTCCATTTTGGAACGTTTTATTGGGTCGACGAGATGGGACAATTTCAAATGGAACATTGGCAAGTCAAGTTCTTCCAACTCCATTTGATCCATTGAATACTATTATTTCAAAGTTCACTAATGCAGGCCTCAATCTCACTGATGTTGTTGCTTTATCAGGTGCTCATACTATTGGGAGAGGAAGGTGTGTACTATTTAGCAATAGATTATTCAACTTCTCAGGAACAGGTTCACCGGATCCAACACTAGACACTAGCATGCTTTCAGATCTACAAAGTTTGTGTCCCCAAAATGGTGATGGAAACACAACTGCTCCACTTGATAGGAACTCCATAGATCTATTTGACAACCACTATTTCAAGAACCTACTCAACTCCAAGGGCCTTCTTAGTTCTGACCAGATACTCTTCTCTAGTGATGAGGCTGTTTCAACTACTAAGGCTTTGGTCCAAACCTATAGCAATAATTCTGCACTTTTCTTTGCAGATTTTGCTAATTCTATGATTAGAATGGGAAATATCAATCCTAAGACTGGCTCTGATGGAGAGATTAGAAACACTTGCAGGGCCATAAATTCCTAG 984 0.4014 MKRGCSCYIWGMSMLVLFLGVRSQLTTDFYNTTCPNLFKVVRRQVQNALMNEMRMGASLLRLHFHDCFVNGCDGSILLDGGNDIEKLAGPNLNSVRGFEVIDTIKSSVEAACSGVISCADILAITARDAVFLSGGPFWNVLLGRRDGTISNGTLASQVLPTPFDPLNTIISKFTNAGLNLTDVVALSGAHTIGRGRCVLFSNRLFNFSGTGSPDPTLDTSMLSDLQSLCPQNGDGNTTAPLDRNSIDLFDNHYFKNLLNSKGLLSSDQILFSSDEAVSTTKALVQTYSNNSALFFADFANSMIRMGNINPKTGSDGEIRNTCRAINS* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1828 327 PANTHER PEROXIDASE 72-RELATED 12 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 181 193 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 300 313 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 Gene3D Peroxidase, domain 2 160 305 - -
Ahy1g1828 327 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 Gene3D - 29 326 - -
Ahy1g1828 327 ProSitePatterns Peroxidases proximal heme-ligand signature. 182 192 IPR019793 -
Ahy1g1828 327 Pfam Peroxidase 41 290 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Haem peroxidase superfamily signature 182 197 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 SUPERFAMILY Heme-dependent peroxidases 24 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Ahy1g1828 327 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Ahy1g1828 327 PANTHER PEROXIDASE 59 12 325 - -
Ahy1g1828 327 CDD secretory_peroxidase 24 325 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1828 Ahy-Chr1 94735328 94738048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1828 13 326 Peroxidase AT5G19890 63.376 7.61e-145 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1828 K00430 - gmx:100817622 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3133 11 148962847 148965185 Ahy1g1828 1 94735328 94738048 hybridization