Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1826 ATGACTCGCCAAGGAGCTTATAAAGAAAGCGATGACATGCTCATTGATGAACCAAAACTGCCTCAGCAAGGCCAAATCGCGGCCCTTCCTAATGAGTTCAACCCCAGTTATCTGAAAATATATTACAGTAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGGAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCACCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAACCCTGCACGTAGGAATGCTTATGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGACTGTAGCCGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGACTAATGAGCAGAGAGCAGCAGTTGCGGACTATTTTCGTGTCTACAAGGGAAATGAAAATAACTATAAGAAGGTTTCCTTGATGGGTCAAGTTCTGCATCCCTTTCTGGCGAGATCATATACTGAAGTTCTCAAGGAATATTTTGAGACAAAACTGCTTACAAGTCAAAATTTACTTTCTAGCGAGGAGAGATATGAAAAGATCCTAGAGATGATTCCTGATCAATCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATTAATATTGTTCGATGGGAGCAGCTTAAACAGTTGCTGCAAAAACATAAGGCACAAGTGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATTTCCTAGGCTTGATATGGAGGTTTCTAAACATATGAACCATTTGCTCAAAGCACCCTTCTGTGTGCACCCAAAAACAGGCCGTGTTTGTGTCCCCATCAACCCAAATAATTGTGAAGAATTTGATCCCACAACGGTGCCAACCCTTATCCAGCTTTTGGAAGAGCTGAATAGGGAGGGCTTGAGGTCTGATGTTGAAGGAGGTTTGTTTGATACTCTGACAATACTTAGGTTTCTTTCTGAATGGAATAAAACTTCACTTGCAAATGCCATCAAGCTCTTTAGGTCATCCTTCCTTCAGCCATTACTGAAAATTTGCAAGGAGGAAATGGAAAGCTCCTATAATGCGAAACTACAGCAGTCGAAGAATCTCCTTAGTTGGTAG 1401 0.4168 MTRQGAYKESDDMLIDEPKLPQQGQIAALPNEFNPSYLKIYYSKLFPHADLYRWMSYGNDGKHPACDSSYLGRREFSYTLDNDIFVRYNTFNSATELENSIKDKCPLKIDIGPIYNLNPARRNAYAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMTVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLTNEQRAAVADYFRVYKGNENNYKKVSLMGQVLHPFLARSYTEVLKEYFETKLLTSQNLLSSEERYEKILEMIPDQSIASELRGKWQESRRSSSAKEDINIVRWEQLKQLLQKHKAQVVRRCVEEIVFTYTFPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPINPNNCEEFDPTTVPTLIQLLEELNREGLRSDVEGGLFDTLTILRFLSEWNKTSLANAIKLFRSSFLQPLLKICKEEMESSYNAKLQQSKNLLSW* 467
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1826 466 CDD AE_Prim_S 47 382 IPR014052 GO:0003896|GO:0006269
Ahy1g1826 466 PANTHER DNA PRIMASE 44 466 - -
Ahy1g1826 466 Pfam DNA primase small subunit 140 373 IPR002755 GO:0003896|GO:0006269
Ahy1g1826 466 PANTHER DNA PRIMASE SMALL SUBUNIT 44 466 IPR014052 GO:0003896|GO:0006269
Ahy1g1826 466 SUPERFAMILY Prim-pol domain 33 396 - -
Ahy1g1826 466 Gene3D DNA primase, PRIM domain 23 447 - -
Ahy1g1826 466 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 39 394 IPR014052 GO:0003896|GO:0006269
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ahy1g1826 Ahy-Chr1 94523752 94536148 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1826 1 466 Core DNA Replication Machinery Family AT5G41880 61.064 0.0 619
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1826 K02684 - tcc:18606689 709.138