Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1825 ATGCTCCAAACTGTGTCTCACTGTCGTTGCTTCTCTTCTTCGCGTGGAGTCTCGCAGTCAAAGCGACTACCTTTCATCGTGTCTCAAGTCTCTAGTCTCTGCTTCAACCCTCTCAGGTCTAAGGTCTCAAGTCTCTTCTTCTCTGCTTCAAGCCTTCATGCCTCTCAGATCCCCAACAACCGCCGCAAAATGACTCGCCAAGGAGCTTATAAAGAAAGCGATGACATGCTCATTGATGAACCAAAACTGCCTCAGCAAGGCCAAATCGCGGCCCTTCCTAATGAGTTCAACCCCAGTTATCTGAAAATATATTACAGTAAGCTGTTTCCTCATGCTGATTTATATAGATGGATGTCATACGGCAACGATGGGAAGCATCCTGCTTGTGATTCATCTTACTTGGGACGAAGGGAATTCTCGTACACCCTAGATAACGATATATTTGTGCGCTACAATACCTTCAATAGTGCCACCGAACTTGAAAACTCCATCAAAGACAAGTGCCCGTTAAAGATAGATATTGGACCCATCTACAACCTCAACCCTGCACGTAGGAATGCTTATGCTGGAGATAATGTTCTCACTCCGGTTGAGAGGGAGCTAATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGCTCAGGTGCTGATGTTTGTCTCAATTGCTGGCCATTAATGACTGTAGCTGTCAAAGTAATAGATACTTCCTTAAGAGATGACTTTGGGTTTAGACATATTCTCTGGGTATATAGTGGTCGGCGTGGTGTACATTGTTGGGTCTGTGATAGAAAGGCAAGACGGTTGACTAATGAGCAGAGAGCAGCAGTTGCAGACTATTTTCGTGTCTACAAGCTATTGCTTCTGAACTTCGAGGAAAGTGGCAAGAAAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATTAATATTGTTCGATGGGAGCAGCTTAAACAGTTGCTGCAAAAACATAAGGCACAAGGGGTGCGTAGGTGTGTTGAAGAGATTGTGTTCACCTATACATATCCTAGGCTTGATATGGAGGTTGGCCACCAAGAGAGGAGAAAGGAAAAGCTTTTAA 1086 0.4383 MLQTVSHCRCFSSSRGVSQSKRLPFIVSQVSSLCFNPLRSKVSSLFFSASSLHASQIPNNRRKMTRQGAYKESDDMLIDEPKLPQQGQIAALPNEFNPSYLKIYYSKLFPHADLYRWMSYGNDGKHPACDSSYLGRREFSYTLDNDIFVRYNTFNSATELENSIKDKCPLKIDIGPIYNLNPARRNAYAGDNVLTPVERELIFDIDMSDYDDVRYCCSGADVCLNCWPLMTVAVKVIDTSLRDDFGFRHILWVYSGRRGVHCWVCDRKARRLTNEQRAAVADYFRVYKLLLLNFEESGKKVGGLLVQKKTLILFDGSSLNSCCKNIRHKGCVGVLKRLCSPIHILGLIWRLATKRGERKSF* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1825 361 SUPERFAMILY Prim-pol domain 96 293 - -
Ahy1g1825 361 PANTHER DNA PRIMASE SMALL SUBUNIT 94 301 - -
Ahy1g1825 361 Pfam DNA primase small subunit 203 294 IPR002755 GO:0003896|GO:0006269
Ahy1g1825 361 CDD AE_Prim_S 110 289 IPR014052 GO:0003896|GO:0006269
Ahy1g1825 361 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 102 288 IPR014052 GO:0003896|GO:0006269
Ahy1g1825 361 Gene3D DNA primase, PRIM domain 86 310 - -
Ahy1g1825 361 PANTHER DNA PRIMASE SMALL SUBUNIT 94 301 IPR014052 GO:0003896|GO:0006269
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1825 Ahy-Chr1 94516128 94530597 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1825 64 288 Core DNA Replication Machinery Family AT5G41880 64.317 7.02e-112 332
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1825 K02684 - cit:102613266 374.785