Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1816 ATGGAGGAAATATCTTCTAGTGTTGCAGTGCCATTTACAATTGGGAACTTGATTCAGAAGGAGTCAGCAGTGGCAACCCACGTGGAGATAACTGAGATGAAGGAGAATGAAGTTGGAGCTGCCGTTGTCTCAGAAATGGTTATTGAATGTGACAGTAATTGGGTCTTGAGAGAAAGCCATAACCCACCAAGGAAGGAAGATGAATTCATGCTGGCTGTGGATTTTCATTGTCTACATAGTTCAAGCTCCAATGACAAATGCAGCCCCTCTGGGGAGGAAGCTGCATCCTTGAAGGCCATTTATTCTGAGATAGATTCGCCAGTTATCATAGGGGTTGATGATAAAATCTATGCTGAGTATGGATTAAACAAGACACATCCAGCACTGCAGCCAGAGGAGAACACAGTTTCTGTTGCAATGGATCTTGAGAGTGAGGATCCAAGGGGATTGGATGGGTCTGATCCAAAGTTTTGTGCTGCACCTCTTGATCAGTCTAACAGAACAAGCAACCCGAATGCTTCGGAAGTGAGTAGTCGTGTTCTCTGTGGTTTTTCATCAATCTGTGGAAAAAGACCAGAGATGGAAGATGCTATAGCTGTTAAGCCTAAACTTCTTCAAGTTCCTTCAAAGATGCTAACAGATAGCCATGTGAACGATAACACAATATGCTCATTAGCCCACTTTTTCGGTGTCTATGATGGACATGGAGGCTTTCAGGTTGCCAATTACTGCCGGGAACGCCTGCATTCGGCTTTGATTGAGGAGATAGAAGCTGCACAATCAAGTTTGGCAGAAACAGAACTAGGAGATTTTTTACAGGACCATTGGAAGAAAGCATTTGTAAGTTGCTTTCAGAAAGTAGATGATGAAGTTGGAGGAATTCGAGCTGGTAATGGCAGAAATAACAGTGGTGGAGCAGAGTCTACGATTGAACCAATTGCTCCTGAGACTGCTGGCTCCACTGCAGTGGTTGCCATATTGAGTCAATCACACATAATAGTCGCAAATTGTGGGGATTCAAGAGCCGTCTTGTATCGTGGAAAAGAAGCCATTCCATTGTCTGCTGACCACAAACCAAACAGGGAGGATGAGTGGGCAAGGATAGAAGCTGCAGGAGGAAGGGTCATACATTGGCAAGGGTACCGAGTTCTTGGCGTTTTGGCAATGTCAAGATCCATAGGTGATAGGTACTTGAAACCATGTATTATTCCAGAACCGGAAGTGAAGTTTGTGCAACGGGAGAAACATGACGAGTGCCTTATTCTAGCTAGTGATGGTTTATGGGATGTGGTGACAAATGAAGAAGCCTGTGAAGTTGCACGGAAGAGGATCCTTCTTTGGCACAAGAAGTATGGTGAGAATGCGTCAATGACCGAACAAGTTGAAGAAGGAGTTGACCCTGCAGCTCACTCTGCTGCAGAGTATCTCTCTAGACTTGCCCTCCAAAGGGGAAGCAAAGATAACATATCTGTAATTGTGATAGACTTGAAGGCTCAAAGAAAAATTAAGAGAAAAGCATAA 1521 0.4418 MEEISSSVAVPFTIGNLIQKESAVATHVEITEMKENEVGAAVVSEMVIECDSNWVLRESHNPPRKEDEFMLAVDFHCLHSSSSNDKCSPSGEEAASLKAIYSEIDSPVIIGVDDKIYAEYGLNKTHPALQPEENTVSVAMDLESEDPRGLDGSDPKFCAAPLDQSNRTSNPNASEVSSRVLCGFSSICGKRPEMEDAIAVKPKLLQVPSKMLTDSHVNDNTICSLAHFFGVYDGHGGFQVANYCRERLHSALIEEIEAAQSSLAETELGDFLQDHWKKAFVSCFQKVDDEVGGIRAGNGRNNSGGAESTIEPIAPETAGSTAVVAILSQSHIIVANCGDSRAVLYRGKEAIPLSADHKPNREDEWARIEAAGGRVIHWQGYRVLGVLAMSRSIGDRYLKPCIIPEPEVKFVQREKHDECLILASDGLWDVVTNEEACEVARKRILLWHKKYGENASMTEQVEEGVDPAAHSAAEYLSRLALQRGSKDNISVIVIDLKAQRKIKRKA* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1816 506 ProSiteProfiles PPM-type phosphatase domain profile. 181 496 IPR001932 -
Ahy1g1816 506 PANTHER ALPHABET, ISOFORM E-RELATED 81 505 - -
Ahy1g1816 506 ProSitePatterns PPM-type phosphatase domain signature. 228 236 IPR000222 GO:0043169
Ahy1g1816 506 SUPERFAMILY PP2C-like 174 497 IPR036457 -
Ahy1g1816 506 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 81 505 - -
Ahy1g1816 506 CDD PP2Cc 182 496 IPR001932 -
Ahy1g1816 506 Pfam Protein phosphatase 2C 193 489 IPR001932 -
Ahy1g1816 506 Gene3D - 171 506 IPR036457 -
Ahy1g1816 506 SMART PP2C_4 171 494 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1816 Ahy-Chr1 94393603 94396871 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1816 166 505 PP2C-type Phosphatase Gene Family AT4G26080 60.174 9.16e-136 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1816 K14497 - gmx:100802159 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3136 11 149019600 149022885 Ahy1g1816 1 94393603 94396871 hybridization
Ahy1g1816 1 94393603 94396871 Ahy13g2282 13 47110623 47114232 PCT
Ahy1g1816 1 94393603 94396871 Ahy3g2005 3 44316710 44320304 PCT
Ahy13g2282 13 47110623 47114232 Ahy1g1816 1 94393603 94396871 PCT
Ahy3g2005 3 44316710 44320304 Ahy1g1816 1 94393603 94396871 PCT