Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1815 ATGAGGAAAGGACTTCTGGGCCCCAGTCTCAAGCTCTCTGTCCCTGCTTCATCTGATCAAGCTTCTTTTTCCAAGTTCCTGACTGAAAGTGGAACCTTTAAAGATGGGGATCTGCTTGTCAACAGGGATGGAGTTAGAATTGTTTCTCAGAGTGAAGTGGAGCCTCCACCTCCAAACCCGATCATGCCGATAGACAACCAGCTAAGTTTGGCAGATATAGACACAATCAAAGTGGTTGGAAAAGGAACTGGAGGGGTTGTGCAGTTGGTGCAACATAAATGGACTAATCAGTTTTTTGCATTAAAGGAAATTCAAATGAATATCGAGGAGTCTATGCGAAAGCAGATAGCACAAGAGCTGAAAATTAATCAATCAGCACAATGTCCTTATGTTGTTGTCTGCTACCAGTCATTCTATGCCAATGGTGTTATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGCGGATCTTCTGAAGAAAGTCAAAACAATTCCAGAGGCTAATCTTGCAGCCATCTGTAAACAGGTGCTAAAGGGATTAATGTATCTTCACCATGAAAAACATATCATCCACAGAGACTTGAAACCTTCTAATTTGTTGATAAATCATAGAGGTGAAGTAAAGATTACTGATTTTGGTGTGAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACTTTCATCGGCACATTCAACTATATGTCTCCGGAGAGGATCAACGGTAGCCAGCGTGGCTATAACTACAAAAGTGATATATGGAGCTTGGGATTAATATTGCTCGAGTGTGCTATGGGGAGGTTTCCATACACACCACCAGATCAAAGTGAGAGATGGGATAGTATTTTCGAACTAATTGAAACCATTGTAGATAAACCTCCTCCTACTGCTCCATCAGAACACTTTTCTGCAGAATTTTGCTCATTTATATCAGCATGCTTACAGAAAGACCCGAAGGATAGACTAACAGCTCAGGAACTTATGGGACATCCTTTTGTCAGCATGTACGATGACTTGCATATAGATCTTGGAGCATACTTCTCCAACGCAGGGTCTCCACTCGCAACCTTATAA 1080 0.4148 MRKGLLGPSLKLSVPASSDQASFSKFLTESGTFKDGDLLVNRDGVRIVSQSEVEPPPPNPIMPIDNQLSLADIDTIKVVGKGTGGVVQLVQHKWTNQFFALKEIQMNIEESMRKQIAQELKINQSAQCPYVVVCYQSFYANGVISIILEYMDGGSLADLLKKVKTIPEANLAAICKQVLKGLMYLHHEKHIIHRDLKPSNLLINHRGEVKITDFGVSAIMESTSGQANTFIGTFNYMSPERINGSQRGYNYKSDIWSLGLILLECAMGRFPYTPPDQSERWDSIFELIETIVDKPPPTAPSEHFSAEFCSFISACLQKDPKDRLTAQELMGHPFVSMYDDLHIDLGAYFSNAGSPLATL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1815 359 CDD PKc_MAPKK_plant_like 88 339 - -
Ahy1g1815 359 SMART serkin_6 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1815 359 Pfam Protein kinase domain 75 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1815 359 SUPERFAMILY Protein kinase-like (PK-like) 70 341 IPR011009 -
Ahy1g1815 359 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Ahy1g1815 359 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 359 - -
Ahy1g1815 359 Gene3D Phosphorylase Kinase; domain 1 62 152 - -
Ahy1g1815 359 Gene3D Transferase(Phosphotransferase) domain 1 153 354 - -
Ahy1g1815 359 ProSitePatterns Protein kinases ATP-binding region signature. 79 102 IPR017441 GO:0005524
Ahy1g1815 359 ProSiteProfiles Protein kinase domain profile. 73 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1815 359 PANTHER MAP KINASE KINASE 1 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1815 Ahy-Chr1 94389412 94393272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1815 1 330 MAP Kinase Kinase Gene Family AT4G29810 66.372 5.74e-167 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Ahy1g1815 Pkinase 1.30E-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1815 K20603 - gmx:100789734 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3137 11 149023242 149027087 Ahy1g1815 1 94389412 94393272 hybridization
Ahy1g1815 1 94389412 94393272 Ahy13g2283 13 47114563 47118465 PCT
Ahy1g1815 1 94389412 94393272 Ahy3g2006 3 44320657 44324158 PCT
Ahy13g2283 13 47114563 47118465 Ahy1g1815 1 94389412 94393272 PCT
Ahy3g2006 3 44320657 44324158 Ahy1g1815 1 94389412 94393272 PCT