Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1805 ATGCTTACATGCATAGCACGTCCCAAGAAATCAGGCACGGGCAGCAACAACGAGTCTCTGAGTAAGACCGATGATTCCGATCCCAACAACAAAAACCAGTCCATGAAATCTCTCACTTCCCAGATAAAGGACATGGCGCTGAAGGCGTCGGGGGCGTACAAGCATTGCGCGCCGTGCACGGCGGGGCCAGCGGGGAGACTGGTGAGGAGAAACGGGGAGTCGTCGCCGGAGACGGACTCGGACAGGTTCAGGTGGTCGTACCGGAGGACAGGGAGCTCGACGAGAGGTTGGGGGAAGGAGATGGAGGCGAGGCTGAAGGGGATATCGTCGTCGAGTGGGGAAGGCACGCCGAACTCCGCCAGCGGACGGCGGTTGGAGCCGGTAGTTCTGTTCGTCGAAGAGAATGAACCAAAGGAGTGGGTGGCGAACGTGGAGCCCGGCGTTTTGATCACCTTCGTGTCGCTTCCACGTGGCGGCAACGATCTCAAGCGCATTCGTTTCAGTCGCGAGATGTTTAACAAATTGCAAGCTCAAAGGTGGTGGGCGGAGAACTATGACAGGGTGATGGAACTTTACAATGTTCAAAGGCTTAACCGTCAAGCATTCCCTCTTCCAACACCGCCAAGGTCCGAAGATGAGATCTCAAAGCTTGAATCAGCAGAGGAGAGCCCAGTAACACCACCACTAAGTAGGGAAAGACTAACTCGCAATTTGCACCGTCCAACAGGTATGGGAGTGGGATACTCTTCCTCGGATTCCTTCGATCATCAATCGATGCAATCCCGGAAGCTGCATGAATTAAATGGTGTTAACTCAACTCCAAAAGTCTCAACCATTAGTGCTGCCAAGACTGAGATATCGTCAATGGATGCTTCAATCAGAAGTAGCTCATCCAGAGAGGCTGATCAATCCGGCGATCTATCAATCAGCAATGCAACCGATTTGGATACCGAATGGGTTGAGCAAGATGAACCTGGTGTTTATATTACCATCAGAGCATTGCCAGGTGGCAAAAAGGAGCTCAGACGAGTTAGGTTCAGCCGAGAAAAATTTGGGGAGATGCATGCTAGATTATGGTGGGAGGAGAATCGTGCTAGAATACATGAACAATACTTGTGA 1119 0.5183 MLTCIARPKKSGTGSNNESLSKTDDSDPNNKNQSMKSLTSQIKDMALKASGAYKHCAPCTAGPAGRLVRRNGESSPETDSDRFRWSYRRTGSSTRGWGKEMEARLKGISSSSGEGTPNSASGRRLEPVVLFVEENEPKEWVANVEPGVLITFVSLPRGGNDLKRIRFSREMFNKLQAQRWWAENYDRVMELYNVQRLNRQAFPLPTPPRSEDEISKLESAEESPVTPPLSRERLTRNLHRPTGMGVGYSSSDSFDHQSMQSRKLHELNGVNSTPKVSTISAAKTEISSMDASIRSSSSREADQSGDLSISNATDLDTEWVEQDEPGVYITIRALPGGKKELRRVRFSREKFGEMHARLWWEENRARIHEQYL* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1805 372 Pfam Transcription factor regulating root and shoot growth via Pin3 317 371 IPR013591 -
Ahy1g1805 372 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Ahy1g1805 372 MobiDBLite consensus disorder prediction 287 309 - -
Ahy1g1805 372 MobiDBLite consensus disorder prediction 9 43 - -
Ahy1g1805 372 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 372 - -
Ahy1g1805 372 Pfam Transcription factor BRX N-terminal domain 28 59 IPR027988 -
Ahy1g1805 372 MobiDBLite consensus disorder prediction 1 43 - -
Ahy1g1805 372 MobiDBLite consensus disorder prediction 244 259 - -
Ahy1g1805 372 MobiDBLite consensus disorder prediction 203 259 - -
Ahy1g1805 372 ProSiteProfiles BRX domain profile. 317 372 IPR013591 -
Ahy1g1805 372 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 372 IPR044532 -
Ahy1g1805 372 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
Ahy1g1805 372 MobiDBLite consensus disorder prediction 61 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1805 Ahy-Chr1 94306152 94310277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1805 1 372 Major Intrinsic Protein MIP AT1G31880 43.846 3.16e-85 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1805 - - aip:107620530 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g3150 11 149117581 149121910 Ahy1g1805 1 94306152 94310277 hybridization
Ahy1g1805 1 94306152 94310277 Ahy13g2301 13 47871527 47879085 PCT
Ahy1g1805 1 94306152 94310277 Ahy3g2016 3 45129558 45137465 PCT
Ahy13g2301 13 47871527 47879085 Ahy1g1805 1 94306152 94310277 PCT
Ahy3g2016 3 45129558 45137465 Ahy1g1805 1 94306152 94310277 PCT