Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1774 ATGAGGAAGGACGACGTGGTTAGAGATAATCAAGGTAGAATCATTAGCAGGAAACTTGTTTGCAACAAAGAGTGCTGGAGAAATATGAGGTATCTCGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTACGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATCTGACGCCACCCAAATTTGCGCATCTGAAGGGTGGATATCGTCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCAGGCAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTACTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTGCCTGATGCGACCCATCGGTTATGCGGCTGGCATCTGCAGAGAAATGCATGTGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAGGGTCTTATATACGACAATAACAACCAGAGAGACTTTGATCGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGCGGTACCTGGATGGAGAAGACGTATGAAACTCGTGAGATGTGGTCCCATTGTTTCCTACGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTCAAGAAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGCGTGACTGCTTTCGGAGACCCGGCCAAAGATCGACAGGTGGAAGTCGATAGAGATTCGTTGATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGAAATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCGTTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATCCTGCAGACTTTGATGAAGTTCAGTCTGAACTTGTCAATTTAATTATCCGCCTACAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAATGATCCCTTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAGGTACGGTCATTACTACAAGCACTGTCCAGATCTGATGCAGCATAGTGTGGAAGGTAACCCTCGCGATCGATCATACGGCAATGCGTCAGCCAAGGACTCAGGTTTTAGTCCAGAAAGGTTTGCTAATTCTTCGAGGTCGTTCTCAATTAAGTCCGAACACCACTCAGGACCTAATACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAACCGGAAGGGTAAAGACAACACTTTTGTCGAGTGGAGCCTCCATGAAAGCAGTGAATCCATTGACACGAATGGTGTTTTCAATAAAAATCTCGACTCGTTAACACAGGTGAAGGAGTCACATCAGGACAAGATACATTCATTCACGAACTATGAATGCGATAATGATGTCATTGATGATAAATGTGACACACGACATGTGCAGATCGATGTCCGAGATCAGTTACCATCGTCACTGCCTTGTGGCAACAAACAAGGATCATTTATTGACCGCAATGTATTTGTCACTGCTTAG 2214 0.439 MRKDDVVRDNQGRIISRKLVCNKECWRNMRYLDLDDRSREARSLTRTKCPARLRVKLDYGCGRWKVSCFVESHNHDLTPPKFAHLKGGYRHAGFTRKDLYNHIDRYRQAKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNACENIKNPNFLRDFKGLIYDNNNQRDFDRRWAAILDKHNLVGGTWMEKTYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYERSASCYFTRNIFKKIRNEIQRAGALNITVLSTTLDKVEFSVTAFGDPAKDRQVEVDRDSLIYKRWTKNAKNEFISTEMPVNDDIERVLKFRVGALASNCNKLCDIACKDPADFDEVQSELVNLIIRLQSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRACSNCHRYGHYYKHCPDLMQHSVEGNPRDRSYGNASAKDSGFSPERFANSSRSFSIKSEHHSGPNTKPFKKGGTRKFTATGMRNRKGKDNTFVEWSLHESSESIDTNGVFNKNLDSLTQVKESHQDKIHSFTNYECDNDVIDDKCDTRHVQIDVRDQLPSSLPCGNKQGSFIDRNVFVTA* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1774 737 Pfam FAR1 DNA-binding domain 8 78 IPR004330 -
Ahy1g1774 737 ProSiteProfiles Zinc finger CCHC-type profile. 559 574 IPR001878 GO:0003676|GO:0008270
Ahy1g1774 737 MobiDBLite consensus disorder prediction 600 619 - -
Ahy1g1774 737 PANTHER OS02G0262500 PROTEIN 2 81 - -
Ahy1g1774 737 Pfam MULE transposase domain 165 259 IPR018289 -
Ahy1g1774 737 MobiDBLite consensus disorder prediction 583 639 - -
Ahy1g1774 737 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 81 IPR031052 GO:0006355
Ahy1g1774 737 SUPERFAMILY Retrovirus zinc finger-like domains 545 577 IPR036875 GO:0003676|GO:0008270
Ahy1g1774 737 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 88 421 IPR031052 GO:0006355
Ahy1g1774 737 PANTHER OS02G0262500 PROTEIN 88 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1774 Ahy-Chr1 94058254 94061068 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g1774 MULE 3.00E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1774 - - ahf:112755379 1345.49