Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1762 ATGGCCGCTGCTCTTTTCTGTTTCTTCTTCCTCCTTCCTCTCCCTTCCTTCTCCATCACCGACGGCGAAGCTTTACTCAAACTCAAACAAGCCCTCAATAACCCTCCCGCCCTCTCCTCATGGGTCCCAAACAAGGACCCTTGCGCCCTCCCCCTCTGGGTTGGCGTCCTCTGCGCTAAGGACACCATCAACGGCATCAACCTCGCCAACATGGGACTCTCCGGCACCATCGACGTCGACGCCCTCTTGCAAATCCCCTCCCTCAGGACCATCAGCTTCATCAACAACTCATTATCCGGCCCCATTCCCAACCTCAACAGGATCGGCGCCCTCAAAGCCATTTACCTCAACACCAACCAATTCTCCGGTTCCATTCCGCCTGATTACTTCGACAAGTTAGCCTCCTTGAAGAAGCTATGGCTCTCCGACAATAAATTCTCCGGTAACATACCCATATCATTGACCAAGCTTCGCTTCCTTTCGGAGTTGCGCCTCGACAAAAACGACTTCTCAGGGACTCTACCTGACTTCACCCAACCAATAAGAATCCTCGACTTTTCCAACAACAAGCTAGAAGGTCCAATACCACCATCCATGGCGGGATTTGACGCTAGTTCCTTCGCCGGGAATCCAGCTCTTTGCGGGAAGCCTCTCAAGGAATGCGGCGGTGGGGACGCCGCTCCTTCTGAGCCGGCGAGCTCTGGGGGCAGCGCCGGCGATGGATTGAGTTGGTTCTGGAAGATCCTGTTTATCATTCTGCTGGCGGCGATTCTGGCAGGAGTGTTCGTGTTGGTGAAGAATCAACGGGACCAAAGTGATAACTTCAGCGTGATGAGCAGAGGAAACAGCCATGTGGACGAGGAGGTGATGCAGGTGCACGTGGCGAAGAGCGTTAAGGGATCAGAAGGGGGCAGCGGCACAGGCATTGGCGGAAAGAGAGGAGGTGGCGGGAGAGGGGGGATGGGTGACCTCATAATGGTGAACGATGAGAAGGGCGTGTTTGGGCTGACGGACTTGATGAAGGCGGCAGCGGAGGTGCTGGGGAACGGGGGACTAGGGTCGGCGTACAAGGCGGCGATGGCGAACGGGATATCGGTGGTGGTTAAGAGGATGAGGGAGATGAATAAGGTGAGCAGAGACATATTCGACGCGGAGATGAGACGGTTTGGAAGGATCAGAAACCGTAACATCCTGACTCCTCTTGCTTACCATTATCGCAAGGAGGAGAAGCTGTTTGTGACGGAGTACATCCCCAAAGGAAGCTTGCTTTATGTGCTGCATGGAGATAGAGGATCCAGCCATGGCGAACTCACCTGGCCAACACGTTTCGCCATTGTCAAGGGAATCGCAAAAGGTTTGGCTTTCCTCTACACTGAATTTTCAACCGAAGAGCTTCCCCATGGGAACCTCAAATCCAGCAACATTCTCCTCACCAACCAGTATGAGCCTCTCCTCAGCGACTATGGATTCCATTCGCTCATGAATCCCAACTACGCCATTCAAACCTTGTTTGCCTACAAAACTCCAGACTACACCGAATACAAACACGTGTCTCAGAAGACCGATGTGTACTGCCTTGGCATCATCATTCTCGAGATCATAACCGGCAAGTTCCCCTCTCAGTATCACAGCAATGGCAAGGGCGGCACCGATGTTGTGCAGTGGGTGTCCACCGCCATTTCCGAGAAAAGAGAGGCCGATTTAATCGACCCGGACTTGCACCCTAACAGCAGCTCTCTCCCTCAGATGCTGCACCTCCTCCGCATTGGAGCTGACTGCACGGAACCCAACCCCCAACGACGTCTTCCCATGAAGGAAGCCATTAGGAGGATAGAGGAACTACAGCTTTAA 1851 0.5359 MAAALFCFFFLLPLPSFSITDGEALLKLKQALNNPPALSSWVPNKDPCALPLWVGVLCAKDTINGINLANMGLSGTIDVDALLQIPSLRTISFINNSLSGPIPNLNRIGALKAIYLNTNQFSGSIPPDYFDKLASLKKLWLSDNKFSGNIPISLTKLRFLSELRLDKNDFSGTLPDFTQPIRILDFSNNKLEGPIPPSMAGFDASSFAGNPALCGKPLKECGGGDAAPSEPASSGGSAGDGLSWFWKILFIILLAAILAGVFVLVKNQRDQSDNFSVMSRGNSHVDEEVMQVHVAKSVKGSEGGSGTGIGGKRGGGGRGGMGDLIMVNDEKGVFGLTDLMKAAAEVLGNGGLGSAYKAAMANGISVVVKRMREMNKVSRDIFDAEMRRFGRIRNRNILTPLAYHYRKEEKLFVTEYIPKGSLLYVLHGDRGSSHGELTWPTRFAIVKGIAKGLAFLYTEFSTEELPHGNLKSSNILLTNQYEPLLSDYGFHSLMNPNYAIQTLFAYKTPDYTEYKHVSQKTDVYCLGIIILEIITGKFPSQYHSNGKGGTDVVQWVSTAISEKREADLIDPDLHPNSSSLPQMLHLLRIGADCTEPNPQRRLPMKEAIRRIEELQL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1762 616 Gene3D Transferase(Phosphotransferase) domain 1 417 616 - -
Ahy1g1762 616 Pfam Leucine rich repeat N-terminal domain 20 58 IPR013210 -
Ahy1g1762 616 Coils Coil 604 616 - -
Ahy1g1762 616 SUPERFAMILY L domain-like 18 217 - -
Ahy1g1762 616 Gene3D Ribonuclease Inhibitor 130 222 IPR032675 -
Ahy1g1762 616 Gene3D Ribonuclease Inhibitor 20 129 IPR032675 -
Ahy1g1762 616 ProSiteProfiles Protein kinase domain profile. 341 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1762 616 SUPERFAMILY Protein kinase-like (PK-like) 345 611 IPR011009 -
Ahy1g1762 616 Pfam Protein kinase domain 345 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1762 616 PANTHER LRR RECEPTOR-LIKE KINASE 5 616 - -
Ahy1g1762 616 Gene3D Phosphorylase Kinase; domain 1 336 416 - -
Ahy1g1762 616 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1762 Ahy-Chr1 93899066 93900916 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1762 1 616 Receptor kinase-like Gene Family AT3G42880 47.196 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Ahy1g1762 Pkinase 6.10E-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1762 - - gmx:100816925 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy1g1762 1 93899066 93900916 Ahy13g2368 13 51967173 51969593 PCT
Ahy1g1762 1 93899066 93900916 Ahy3g2076 3 50049331 50052062 PCT
Ahy13g2368 13 51967173 51969593 Ahy1g1762 1 93899066 93900916 PCT
Ahy3g2076 3 50049331 50052062 Ahy1g1762 1 93899066 93900916 PCT