Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1760 ATGTCCAGCTCATCGGAGTATTCTGGAGTTTCCGGCCAAAATCCGGTGAAGTCGCCGGAGATCTCCACGTTTTCCCAGACTTGTAATCGGTTGAGCCAATACCTCAGAGAAAACGGTTCCTTCGGTGACCTCACCCTCGGCATAACAAAACGCAACCCCGCCCCTGAAACACACGGGTCACCTGAGAACTCATGCTATTCTGCAACAACCATGGAGTTATTTCCCACAAAGGAGAACAATAATGTGACAACCATGGATCTTCTTTATCCACGTGCTCCTGCTTATGCAAACACAAGTGCATTAAAGGATGGTAAAGGTGCACAATTAACAATCTTTTATGGTGGACAAGTGATGGTGTTTGATGACATTCCTGCTGAGAAAGCGGAGGAGATTCTGTCCTTGGCTAAAAGAGGGAACTCTTGTGCATGCGCTTCTACTCAGCACACCCGGCCTTACTTGTTTCAACCCCACTCCCAGCTACAGTCCGCACCTGTTGTTGGTGATCTACCTATTGCAAGGAAGGCTTCGCTGCATCGCTTCCTGGAGAAGAGAAAGGATAGAATTGCTTCAAAAGCACCATATCAAAGCAGCAGCCCCGTCTCGGTCCCTAATAAAGCAGCTGAGTCGTCTATGGCATGGCTTGGGTTAGGAGCTTAA 657 0.484 MSSSSEYSGVSGQNPVKSPEISTFSQTCNRLSQYLRENGSFGDLTLGITKRNPAPETHGSPENSCYSATTMELFPTKENNNVTTMDLLYPRAPAYANTSALKDGKGAQLTIFYGGQVMVFDDIPAEKAEEILSLAKRGNSCACASTQHTRPYLFQPHSQLQSAPVVGDLPIARKASLHRFLEKRKDRIASKAPYQSSSPVSVPNKAAESSMAWLGLGA* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1760 218 ProSiteProfiles Tify domain profile. 102 137 IPR010399 -
Ahy1g1760 218 Pfam tify domain 106 135 IPR010399 -
Ahy1g1760 218 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 20 217 IPR040390 -
Ahy1g1760 218 SMART tify_2 102 137 IPR010399 -
Ahy1g1760 218 Pfam Jas motif 170 195 IPR018467 -
Ahy1g1760 218 MobiDBLite consensus disorder prediction 1 22 - -
Ahy1g1760 218 PANTHER PROTEIN TIFY 10A 20 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1760 Ahy-Chr1 93869396 93870991 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1760 1 218 Tify Gene Family AT1G19180 41.634 1.68e-48 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Ahy1g1760 tify 9.60E-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1760 K13464 - gmx:100527510 231.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy1g1760 1 93869396 93870991 Ahy13g2373 13 52398332 52401216 PCT
Ahy1g1760 1 93869396 93870991 Ahy3g2084 3 50885739 50888607 PCT
Ahy13g2373 13 52398332 52401216 Ahy1g1760 1 93869396 93870991 PCT
Ahy3g2084 3 50885739 50888607 Ahy1g1760 1 93869396 93870991 PCT