Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1747 ATGGCAAAAGGAGGGAAGCTTACAAAGCTGAAGTCAGTGCTGAAGAAATGGAACTCATTTGGCAGCAACAGCGGCGGCGGCGGGAGCAGCAAGCAGAGCCGGCACAACAGCAGCGCGGTGGCAGACGACGTGGAGGGCGGGGATGAGCTCCACCCGGTGTACGTGGGGAAGTCACGGAGGCTGTACCGCGTGTCGTCGGACGTGGTGGAGCACCCAGTGTTCCGCGAACTGGTGGAGAGGTCACGTGAGGAGCACGATCCCCAGCAAGTGGCCACTCGCGTTGCCTGCGAGGTGGTCCTCTTCGAGCATCTCCTCTGGATGCTGGAAAATGCCGATCCCCAACCCGAGTCCCTCGACGAACTCGTCGACTTCTATGCCTGCTAG 384 0.612 MAKGGKLTKLKSVLKKWNSFGSNSGGGGSSKQSRHNSSAVADDVEGGDELHPVYVGKSRRLYRVSSDVVEHPVFRELVERSREEHDPQQVATRVACEVVLFEHLLWMLENADPQPESLDELVDFYAC* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1747 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 127 IPR003676 GO:0009733
Ahy1g1747 127 MobiDBLite consensus disorder prediction 19 45 - -
Ahy1g1747 127 PANTHER SMALL AUXIN-UP RNA-RELATED 4 127 - -
Ahy1g1747 127 MobiDBLite consensus disorder prediction 19 39 - -
Ahy1g1747 127 Pfam Auxin responsive protein 10 108 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1747 Ahy-Chr1 93641895 93642729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1747 7 112 Calmodulin-binding Proteins AT2G24400 25.833 3.55e-07 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1747 - - gmx:100808463 169.859