Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1733 ATGGTTCTTTCTTCAACAAGAAAAGAGAAAAAGCCACCAATCATGGCACTCACCTTCTTGTTGATGCTTCTCCATGGACACTTCACTACTATGGCCTCTGCTTCTCGCACTCGTTTGGGAGGCTCAGCGTGCCTCAAGGTTTCACCTTCTGAGTTCGTCGGTGCTGTTAGGGAAGTTATTGGCCTCTTGGGAGATGTTGCTTCCATCTTGTCCAGGTTTAGCGGTGGCTTTGGTAATTTCCGTCTCGCCAACGCCATTCTTGACTGTCTTGATTTGTTGGACATGTCCTCCGACGAGCTTAACTGGTCTGTCTCCGCTACTCAAAACCCCAAAGGAAAAAACAACAGTACAGGAAACTTAGGATCCGATTTGAAGACATGGCTAAGTGCTGCCCTGGCAAATCCAGAGACATGCCTCGATGGATTCGAAGGCACAAGCAGTATCGTGAAAGGATTAGTCTCCAGCGGCCTTGGACAAGTGACATCGCTGGTGAAGAATCTCCTTGCAAAGGTTGATGTCCCCCACCATGATGTCTCCCACAGTGCCGGCGTGGACCAGTTTCCTTCGTGGGTGAAGCCGGGGGAGAGGAAGCTTCTGCAGGCAAATGGAGTGGCTGCCGATGCTGTGGTGGCTTTAGATGGAAGTGGAAAGTTCACAAGGGTGATGGATGCGATTATGGCTGCGCCGGATTATAGCATGAAGAGGTTTGTGATTTACGTGAAGAGAGGTGTTTACAATGAGAACGTGGAGATTAAGAAGAAGAAGTGGAATATCATGATGATCGGAGATGGTATCGGTGCCACTGTTATTACCGGCAACCGGAGTGTTGTTGACGGCTGGACAACTTTCCGATCTGCCACCTTTGCTGTAAGTGGAAGAGGATTCATAGCACGAGACATTACTTTTCAGAACACAGCAGGACCAGAGAAGCACCAAGCAGTGGCACTAAGATCCGATTCCGACCTCTCAGTCTTCTTCCGTTGTGGAATCTTGGGCTACCAAGACAGCCTCTACACTCACACAATGCGTCAATTCTTCAGAGAGTGCACAATCTCCGGCACAGTCGATTTCATCTTTGGCGATGCAACCGCAGTCTTCCAAAAATGCAATGTACTTGTCAAGAAAGGGTTACAGAATCAAAAGAACACAATCACCGCACAAGGTAGAAAAGATCCTAATGAACCAACAGGATTCTCGTTACAATTCTGCAACGTAACTGCTGATTCTGACCTAGTTTCTTTTGTTAACACCACGGAGACTTTCTTGGGGAGGCCGTGGAAAACGTATTCAAGAACCATTTTTATGCAAAATTATATGAGCGAGATTATAAGGCCGCAAGGGTGGTTAGAGTGGAACGGTAACTTTGCGTTGGATACACTATATTATGCTGAGTATATGAATACTGGTGCCGGTGCAGGTTTAGCTAACAGAGTCAAATGGCCCGGATACCATGTTTTGAATAGCTCCAGTGAAGCTAGCAATTTTACTGTCGCACAGTTCATTCAAGGAAATTTATGGTTGCCTTCAACTGGTGTAGCATTCACAGCTGGATTAACGCTTTAA 1563 0.4683 MVLSSTRKEKKPPIMALTFLLMLLHGHFTTMASASRTRLGGSACLKVSPSEFVGAVREVIGLLGDVASILSRFSGGFGNFRLANAILDCLDLLDMSSDELNWSVSATQNPKGKNNSTGNLGSDLKTWLSAALANPETCLDGFEGTSSIVKGLVSSGLGQVTSLVKNLLAKVDVPHHDVSHSAGVDQFPSWVKPGERKLLQANGVAADAVVALDGSGKFTRVMDAIMAAPDYSMKRFVIYVKRGVYNENVEIKKKKWNIMMIGDGIGATVITGNRSVVDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVALRSDSDLSVFFRCGILGYQDSLYTHTMRQFFRECTISGTVDFIFGDATAVFQKCNVLVKKGLQNQKNTITAQGRKDPNEPTGFSLQFCNVTADSDLVSFVNTTETFLGRPWKTYSRTIFMQNYMSEIIRPQGWLEWNGNFALDTLYYAEYMNTGAGAGLANRVKWPGYHVLNSSSEASNFTVAQFIQGNLWLPSTGVAFTAGLTL* 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1733 520 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 65 169 IPR035513 -
Ahy1g1733 520 Gene3D - 204 520 IPR012334 -
Ahy1g1733 520 Gene3D Invertase/pectin methylesterase inhibitor family protein 53 173 IPR035513 -
Ahy1g1733 520 Pfam Plant invertase/pectin methylesterase inhibitor 84 169 IPR006501 GO:0004857
Ahy1g1733 520 SMART PMEI_2 35 170 IPR006501 GO:0004857
Ahy1g1733 520 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 44-RELATED 47 518 - -
Ahy1g1733 520 PANTHER PECTINESTERASE 47 518 - -
Ahy1g1733 520 SUPERFAMILY Pectin lyase-like 204 517 IPR011050 -
Ahy1g1733 520 ProSitePatterns Pectinesterase signature 1. 232 251 IPR018040 -
Ahy1g1733 520 Pfam Pectinesterase 207 504 IPR000070 GO:0030599|GO:0042545
Ahy1g1733 520 ProSitePatterns Pectinesterase signature 2. 351 360 IPR033131 -
Ahy1g1733 520 CDD PMEI-like_4 17 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1733 Ahy-Chr1 93414617 93417931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1733 16 518 Carbohydrate Esterase AT3G43270 64.603 0.0 705
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1733 K01051 - gmx:100814987 770.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy1g1733 1 93414617 93417931 Ahy13g2434 13 56188054 56192424 PCT
Ahy1g1733 1 93414617 93417931 Ahy3g2186 3 68762441 68766180 PCT
Ahy13g2434 13 56188054 56192424 Ahy1g1733 1 93414617 93417931 PCT
Ahy3g2186 3 68762441 68766180 Ahy1g1733 1 93414617 93417931 PCT