Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1728 ATGGGTTTCTATGCTGAGGACTCATCATCTGCATATGGTTGGACAATAGGTCAAGCCATATATGAAGCAGCTCTAATCATTGCAGTTCTGAGATGGGTCTTGTGCTTGGTTTTCAGGCTCATCAAAGATAGAGGAACAACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTACTCTTGTGTTGACCACGTTTCGTGAGATAATGGAGAGGCTTCCAGAGACAGAAGAAGATACATCTTGTGCAGTGTGCTTGAACCAGATGAAGATGGAAGATGAGGTTAGGGAACTAATGAACTGCTACCATGTCTTCCACAGAGAATGCATCGACAAATGGTTGGACAATGATGACAACAACCAGAACCCTACTTGCCCTCTTTGTAGAGCACCTTTGCTCACTCTTAATCATTGCAGTTATTCTTCATCAGAGAGCTCTTTTGGTTGTGTGCCACCATCTACTCAACCTAGTTGGGCTGTGGAGAGACTTCTCTACCTCTTCGGAGATGATCTTCTTCCTTGCTAG 573 0.4276 MGFYAEDSSSAYGWTIGQAIYEAALIIAVLRWVLCLVFRLIKDRGTTPSSSSSSSSSSSSSSSSSSSSSSSSSSCTLVLTTFREIMERLPETEEDTSCAVCLNQMKMEDEVRELMNCYHVFHRECIDKWLDNDDNNQNPTCPLCRAPLLTLNHCSYSSSESSFGCVPPSTQPSWAVERLLYLFGDDLLPC* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1728 190 SMART ring_2 98 144 IPR001841 -
Ahy1g1728 190 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 189 - -
Ahy1g1728 190 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 189 - -
Ahy1g1728 190 ProSiteProfiles Zinc finger RING-type profile. 98 145 IPR001841 -
Ahy1g1728 190 SUPERFAMILY RING/U-box 92 151 - -
Ahy1g1728 190 SMART ringv_2 97 145 IPR011016 GO:0008270
Ahy1g1728 190 Pfam Ring finger domain 97 145 IPR001841 -
Ahy1g1728 190 MobiDBLite consensus disorder prediction 45 73 - -
Ahy1g1728 190 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 149 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1728 Ahy-Chr1 93319077 93320058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1728 1 187 C3H Transcription Factor Family AT5G20885 45.685 3.07e-43 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1728 K16281 - gmx:100306203 215.312