Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy1g1728 | ATGGGTTTCTATGCTGAGGACTCATCATCTGCATATGGTTGGACAATAGGTCAAGCCATATATGAAGCAGCTCTAATCATTGCAGTTCTGAGATGGGTCTTGTGCTTGGTTTTCAGGCTCATCAAAGATAGAGGAACAACACCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTGTACTCTTGTGTTGACCACGTTTCGTGAGATAATGGAGAGGCTTCCAGAGACAGAAGAAGATACATCTTGTGCAGTGTGCTTGAACCAGATGAAGATGGAAGATGAGGTTAGGGAACTAATGAACTGCTACCATGTCTTCCACAGAGAATGCATCGACAAATGGTTGGACAATGATGACAACAACCAGAACCCTACTTGCCCTCTTTGTAGAGCACCTTTGCTCACTCTTAATCATTGCAGTTATTCTTCATCAGAGAGCTCTTTTGGTTGTGTGCCACCATCTACTCAACCTAGTTGGGCTGTGGAGAGACTTCTCTACCTCTTCGGAGATGATCTTCTTCCTTGCTAG | 573 | 0.4276 | MGFYAEDSSSAYGWTIGQAIYEAALIIAVLRWVLCLVFRLIKDRGTTPSSSSSSSSSSSSSSSSSSSSSSSSSSCTLVLTTFREIMERLPETEEDTSCAVCLNQMKMEDEVRELMNCYHVFHRECIDKWLDNDDNNQNPTCPLCRAPLLTLNHCSYSSSESSFGCVPPSTQPSWAVERLLYLFGDDLLPC* | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy1g1728 | 190 | SMART | ring_2 | 98 | 144 | IPR001841 | - | |
Ahy1g1728 | 190 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 189 | - | - | |
Ahy1g1728 | 190 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 1 | 189 | - | - | |
Ahy1g1728 | 190 | ProSiteProfiles | Zinc finger RING-type profile. | 98 | 145 | IPR001841 | - | |
Ahy1g1728 | 190 | SUPERFAMILY | RING/U-box | 92 | 151 | - | - | |
Ahy1g1728 | 190 | SMART | ringv_2 | 97 | 145 | IPR011016 | GO:0008270 | |
Ahy1g1728 | 190 | Pfam | Ring finger domain | 97 | 145 | IPR001841 | - | |
Ahy1g1728 | 190 | MobiDBLite | consensus disorder prediction | 45 | 73 | - | - | |
Ahy1g1728 | 190 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 149 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy1g1728 | Ahy-Chr1 | 93319077 | 93320058 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy1g1728 | 1 | 187 | C3H Transcription Factor Family | AT5G20885 | 45.685 | 3.07e-43 | 140 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy1g1728 | K16281 | - | gmx:100306203 | 215.312 |