Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1712 ATGGCATCATCAAGCTCGTACAATTCACCTTGCGCTGCCTGCAAATTCTTGAGGAGGAAGTGCATGCCAGGGTGTATCTTTGCGCCTTATTTTCCACCCGAAGAGCCTCAAAAGTTTGCAAACGTGCACAAGATCTTCGGTGCAAGCAATGTTACCAAGCTCCTCAACGAGCTTCTGCCTCATCAAAGGGAGGATGCGGTCAACTCCCTCGCTTATGAGGCAGAAGCTCGCGTGAGAGATCCTGTTTACGGCTGCGTTGGCGCCATATCATTCCTCCAAAGACAAGTCCAAAGACTTCAGAAAGAACTTGATGCCGCCAACGCCGATCTTCTCCGCTATTCCTTTACTGACATCGCTCCGACGCCGGCTCTTTCTATGCCTCCCGGACTAACCAATGCTACTTCCCTTCAACAAATTCCCCAAAGGTTTGGGGCAAGATTTGATAACGAAGGAAGTGGATTCTATAACAATAATCGCCAATATTCACCTAATATTTATTCTTACCCTTACTCTCTTCCCTGGACCGATACCTCTTCCAAGGATATCAGCGATGGGGGCGGGTTAGGTGACGGCGATGGGAGAGGAGGTAATTTGTGA 597 0.4891 MASSSSYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYSFTDIAPTPALSMPPGLTNATSLQQIPQRFGARFDNEGSGFYNNNRQYSPNIYSYPYSLPWTDTSSKDISDGGGLGDGDGRGGNL* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1712 198 Coils Coil 89 109 - -
Ahy1g1712 198 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Ahy1g1712 198 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Ahy1g1712 198 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 186 - -
Ahy1g1712 198 PANTHER ELONGATED PETIOLULE 1 1 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1712 Ahy-Chr1 92053271 92054729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1712 1 119 AS2 family AT5G63090 90.833 1.21e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy1g1712 LOB 3.40E-42 No_clan