Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1679 ATGGGAGTGAGACGATGGTTTTGTTCATGGATTCCGTTTCTGGCGATGGTGATTGTGGAGTGCCTTGACGTTGGGTTGACCACACTTGGCAAAGCAGCCATGTCAAGAGGGATGAACCACTTTATTTTTGTTGTCTACTCAAATGCTCTTGCCACTTTGATCCTCCTCCCTTCTTCTTTCTTCATCAACAGGAACAGAACTACAACACCACCTCTTTCTTTCTCGCTTCTTTGCAAATTCTTCCTCCTTGCCCTTGTTGGCATAACTGTGATGCAGAATTGTGTTTTCACTGGCATAAGCTACAGCTCTCCCACTCTTGGATCTGCTATGAGCAACTTGACTCCAGCAATTACTTTTTTGCTGGCTGTCATATTCAGGATGGAGAAATTTGAAATTAGGAGCTCCATAAGCCAGATCAAGATGCTGGGAGCCGTGGTGTCCATATCAGGAGCATTACTCGTCACCCTTTACAAGGGAAGTCCGATTGCTGGCTTTCAAATTCAACCATTACAACAAATGCTTTCAGAGACTACCAATTGGGTCATTGGTGGCCTCTTTCTTGCCATTGCATCTACATCCCTTGCAATCTGGAATATTGCTCAGGCAGCAATTCTTAAAGGATACCCCTCTCAGTTGACCATTATAGCCTTCTACTGCCTGTTTGGAACCATCCAATGTGCAATACTTTCCTTGATCGTAGTCAGAGATCCAAATGCCTGGAAACTAAGGCCTGACATTGAGCTCACCACCATATTCTATTCAGCAATTTTCGGAAGTGTGGTCACTTTTTCTGTATTGACCTGGTGCATAAATAAAAAAGGACCAGTATTTGTGACCATGTTCAAGCCTTTGGGGATTGCAATTGCTGCATTCTCAAGTGTTGTCTTCCTTGGTGAAACACTTCCTGTTGGCAGGACTATTGGTTTGATGGTAATCATCATCGGATTTTACACAGTACTTTGGGCACAATCCAAAGAAGAAATTGGAGAAGGCATCGATGTAGATAGACAATCATCCCTGTCTGCACAAGCAAGTCCTCTACTAGAGTCACCATGA 1056 0.4375 MGVRRWFCSWIPFLAMVIVECLDVGLTTLGKAAMSRGMNHFIFVVYSNALATLILLPSSFFINRNRTTTPPLSFSLLCKFFLLALVGITVMQNCVFTGISYSSPTLGSAMSNLTPAITFLLAVIFRMEKFEIRSSISQIKMLGAVVSISGALLVTLYKGSPIAGFQIQPLQQMLSETTNWVIGGLFLAIASTSLAIWNIAQAAILKGYPSQLTIIAFYCLFGTIQCAILSLIVVRDPNAWKLRPDIELTTIFYSAIFGSVVTFSVLTWCINKKGPVFVTMFKPLGIAIAAFSSVVFLGETLPVGRTIGLMVIIIGFYTVLWAQSKEEIGEGIDVDRQSSLSAQASPLLESP* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1679 351 Pfam EamA-like transporter family 182 320 IPR000620 GO:0016020|GO:0016021
Ahy1g1679 351 Pfam EamA-like transporter family 24 155 IPR000620 GO:0016020|GO:0016021
Ahy1g1679 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 324 - -
Ahy1g1679 351 PANTHER WAT1-RELATED PROTEIN 9 346 - -
Ahy1g1679 351 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 158 - -
Ahy1g1679 351 PANTHER WAT1-RELATED PROTEIN 9 346 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1679 Ahy-Chr1 87773985 87776002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1679 4 350 Nodulin-like Gene Family AT3G28050 44.628 2.27e-88 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1679 - - ccaj:109809148 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1759 11 112398502 112400504 Ahy1g1679 1 87773985 87776002 hybridization