Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1672 ATGCGTGGTATCAGCTATTTGAATAATAAGTACTCATCACCATCTCCATTCCAATCTCATTCGTATGATGCTAATAACATGCCGCCATCATCATCTGTAATTAGCAGAATAAGTCCACTCATTCTGTTAGTTATAATAGTCTTAGCAGTTATCTTCTTCGCTTATGGCCTTGTCCATTTGATTCTATGGTTCTTCATCAAAATCCTATCATCATCCTCGTCGTCGTCGTCTAACAGGTTCCAAGAATCATCGAGGCGCTCCCGCGCGATTCAGAGACAGCTTCACCATCTCTTCCGAATGCACGATTCGGGACTAGAACAATCCACCATTGATGCTCTCCCAGTGTTCTACTACCAAGAATTGTTGGGGCTAAAAGAACCATTTGATTGTGCAGTGTGCCTCTGCGAATTCTCTGCGAACGAGAAGCTGAGGTTGGTTCCAATTTGCAGCCATGCATTTCACATGAACTGCCTCGACACATGGCTTCTCTCAAACTCTACATGTCCTCTCTGTAGAGCAAATCTCTCTAGCTCTATCGTGAATCAGAATCAGAATCCAGTTCGTGTTGTTGAGGAAGAGAATAAGAATGGTGGTGAAGGGAGTGAAGAGGGAGACGAAGGTGGTGGTGGGAGGAAAAGGGTGTTTTGTGTGAGACTTGGGAAACTGAGGAACGGTGAATTGATTGAGAGAGAAGAGAGTAGTAGTAGTAGTATTGGGTTGGATGGGAGAAGATGCTACTCAATGGGTTCATATGAGTATGTGGTAGAACAAGAGGTGAGAGCTTCTCAGTTTCAAAGATTTGGCTATGGTCCAACAAGATCAAATATAATCATCATAGATCCAATAATGCAGATGCAGATTTTCCTTTGTCACCAATAA 879 0.43 MRGISYLNNKYSSPSPFQSHSYDANNMPPSSSVISRISPLILLVIIVLAVIFFAYGLVHLILWFFIKILSSSSSSSSNRFQESSRRSRAIQRQLHHLFRMHDSGLEQSTIDALPVFYYQELLGLKEPFDCAVCLCEFSANEKLRLVPICSHAFHMNCLDTWLLSNSTCPLCRANLSSSIVNQNQNPVRVVEEENKNGGEGSEEGDEGGGGRKRVFCVRLGKLRNGELIEREESSSSSIGLDGRRCYSMGSYEYVVEQEVRASQFQRFGYGPTRSNIIIIDPIMQMQIFLCHQ* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1672 292 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 181 IPR013083 -
Ahy1g1672 292 SUPERFAMILY RING/U-box 109 184 - -
Ahy1g1672 292 ProSiteProfiles Zinc finger RING-type profile. 130 172 IPR001841 -
Ahy1g1672 292 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 23 257 - -
Ahy1g1672 292 CDD RING-H2_PA-TM-RING 129 172 - -
Ahy1g1672 292 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 23 257 - -
Ahy1g1672 292 SMART ring_2 130 171 IPR001841 -
Ahy1g1672 292 Pfam Ring finger domain 129 172 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1672 Ahy-Chr1 87382215 87383093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1672 31 259 C3H Transcription Factor Family AT2G18650 43.123 4.11e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1672 - - gmx:100807741 256.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1753 11 112148097 112149234 Ahy1g1672 1 87382215 87383093 hybridization