Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1662 ATGGCAGCTCGTAGACTTTCATGGCTTCTCTCACGCTCCCTTTCTGCTGCTTCTGGAGCTGACTCCTTTCTTCACTCACTCGGAAGAAACTCTGGCGGAGGGTGCAGAAAATTGAAGAGGTTTAGCACAGCTGCAGCGGTTGATGAAGTGATTATTCCACAAGTTCAAATCAATTACACTCAGCATCTCATAGATGGCAAGTTTGTGGATTCTGCATCAGGGAAGACTTTTCCAACCTATGACCCGCGCACAGGGGAAGTTATAGCTCAAGTAGCTGAAGGAGACGCTGAAGATATCAACCGCGCCGTCGCCGCTGCGCGAAAGGCCTTTGATGAAGGACCCTGGCCTAAAATGACTGCTTATGAAAGGTGTCGGATATTGCTGCGGTTTGCTGATTTGGTGGAGAAGCATAGTAAAGAGCTTGCAGCTCTAGAGACATGGAACAATGGAAAGCCTTATGAGCAATCTTTCAACGACGAATTGCCATTGTTTGTGCGTTTGTTCCACTACTATGCTGGTTGGGCTGATAAAATTCACGGGATGACCGTACCGGCTGATGGAAAATATCACGTGCAAACATTGCATGAACCAATTGGGGTTGCAGGACAAATCATACCTTGGAATTTTCCTCTAATTATGTTTGCTTGGAAAGTTGGTCCAGCTCTGGCTTGTGGTAACACTGTCATTTTGAAGACTGCTGAGCAAACACCCCTCACCGCTCTTTATGTGGCTAAACTCTTTCATGAGGCTGGTCTTCCACCAGGTGTTCTGAATATAGTTTCTGGATTTGGCCCAACTGCTGGTGCAGCTCTTGCAAGTCACATGGACGTTGACAAGCTAGCATTTACTGGATCAACAGACACTGGAAAAATTGTGCTTGAATTGGCTGCAAGAAGCAATCTGAAGCCTGTGACATTGGAGCTGGGAGGCAAATCACCTTTTATTGTGTGTCATGATGCTGATGTTGACCACGCTGTTGAACAAGCACACTTTGCTCTCTTCTTTAATCAGGGACAATGTTGCTGTGCTGGGTCTCGAACCTTTGTACATGAGCGTATCTATGATGAGTTCTTGGAGAAGTCAAAGAAACGTGCTTTGAGACGCGTTGTTGGTGATCCATTCAAGAAGGGTGTTGAACAAGGCCCTCAGATTGACACAGAACAATTTGAGAAAGTGCTTAGGTACATAAGATCTGGAATTGAAAGCAATGCTACCCTTGAATGTGGGGGTCAGCGATTGGGCTCAAAAGGCTTCTTCATCGAGCCAACTGTTTTCTCCAATGTTAAGGACGATATGCTGATAGCCAAAGACGAAATATTCGGGCCGGTTCAGTCCATCTTGAAATTCAAGGACATTGAAGAAGTAATAAAGAGAGCAAATGCAACACGATATGGACTAGCAGCAGGAGTGTTCACAAAGAACGTACACACAGCAAACACATTGATGAGGGCACTGAGAGTTGGAACGGTTTGGATCAACTGTTTCGATGTATTCGACGCTGCCATTCCCTTTGGAGGCTACAAGATGAGTGGCATTGGGAGGGAGAAAGGAATCTACAGTCTCAACAACTACCTTCAGATCAAAGCTGTTGTTGAACCACTCAAGAATCCTGCTTGGATTTAA 1623 0.4559 MAARRLSWLLSRSLSAASGADSFLHSLGRNSGGGCRKLKRFSTAAAVDEVIIPQVQINYTQHLIDGKFVDSASGKTFPTYDPRTGEVIAQVAEGDAEDINRAVAAARKAFDEGPWPKMTAYERCRILLRFADLVEKHSKELAALETWNNGKPYEQSFNDELPLFVRLFHYYAGWADKIHGMTVPADGKYHVQTLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTVILKTAEQTPLTALYVAKLFHEAGLPPGVLNIVSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAARSNLKPVTLELGGKSPFIVCHDADVDHAVEQAHFALFFNQGQCCCAGSRTFVHERIYDEFLEKSKKRALRRVVGDPFKKGVEQGPQIDTEQFEKVLRYIRSGIESNATLECGGQRLGSKGFFIEPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIEEVIKRANATRYGLAAGVFTKNVHTANTLMRALRVGTVWINCFDVFDAAIPFGGYKMSGIGREKGIYSLNNYLQIKAVVEPLKNPAWI* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1662 540 Pfam Aldehyde dehydrogenase family 68 530 IPR015590 GO:0016491
Ahy1g1662 540 CDD ALDH_F2BC 57 531 - -
Ahy1g1662 540 SUPERFAMILY ALDH-like 55 534 IPR016161 GO:0016491
Ahy1g1662 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 74 530 IPR016162 GO:0016491
Ahy1g1662 540 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 540 - -
Ahy1g1662 540 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 28 540 - -
Ahy1g1662 540 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 312 501 IPR016163 GO:0016620
Ahy1g1662 540 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 334 345 IPR016160 GO:0016491
Ahy1g1662 540 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 306 313 IPR029510 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1662 Ahy-Chr1 86917619 86923061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1662 1 540 Aldehyde Dehydrogenase Gene Family AT3G48000 79.705 0.0 902
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1745 11 111918811 111923767 Ahy1g1662 1 86917619 86923061 hybridization