Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1652 ATGGCGATGAAGAACTTGTACTGGTTGAAGGAAATGTCGAACAACGTGAAGTCAGGAGGGAGAGGGAGAGGAGGGAGGAGGCTGTCGCTGGGAGAATACAGAAGAGCGGTGTCATGGTCGAAGTACATAGTGTCGTCCGGTGCCGCCATTAAAGGAGAGGGAGAAGAGGAATGGAGTGCTGATCTGTCACAGCTGTTCATAGGTTCGAAATTCGCTTCTGGAAGGCACAGCAGGATCTACAGAGGGATATACAAGCACATCGATGTTGCCATCAAGCTTGTGAGCCAGCCTGAGGAGGATGAGGAATTGGCTGCTCAGCTTGAGAACCACTTCACTTCTGAGGTTGCGCTTCTCTTTCGCTTGCACCATCCTAATATCATTACTTTTGTAGGAGCTTGCAAGAAGCCCCCTGTATTTTGCATAATCACAGAATACTTAGCTGGTGGCTCATTGAGAAGCTTCCTTCAAAGGCAAGGACCACATTCACTCCCTCTAGAACTTGTTCTAAAGCTAGCCTTAGACATTGCCAAGGGTATGCAATACCTTCACTCTCAGGGCATACTCCACAGGGACCTCAAATCAGAGAATCTTCTCTTGGGTGAAGACATGTGTGTCAAAGTAGCAGACTTTGGGATCTCGTGCTTAGAATCCCAGATTGGTAGTGCTAAAGGGTTCACTGGAACTTACCGTTGGATGGCGCCAGAAATGATCAAGGAGAAGCACCATACCAAGAAAGTAGATGTTTACAGTTTCGCCATTGTTCTTTGGGAGCTTCTAACAGGACTAACACCCTTTGAGAATATGACACCAGAACAGGCAGCATTTGCAGTGACTCACAAGAATGCAAGGCCTCCATTACCATGTGATTGTCCATGGGCATTTAGTAATCTAATAAACAAATGCTGGTCAAGCAATCCGAAAAAACGACCACACTTTGATGAGATAGTCACTATTTTGGAGAGCTACATAGAATCACTGGAAAAAGATCCTGAATTTTTCACCAATTACAAACCACGTCGTCCACGTAATCTGGTTCTCAAATGCTTACCAAAGTGTAACTGTCGCCATGTATCCTCTTCTTCCAAATCTTAG 1092 0.456 MAMKNLYWLKEMSNNVKSGGRGRGGRRLSLGEYRRAVSWSKYIVSSGAAIKGEGEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHIDVAIKLVSQPEEDEELAAQLENHFTSEVALLFRLHHPNIITFVGACKKPPVFCIITEYLAGGSLRSFLQRQGPHSLPLELVLKLALDIAKGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQIGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFAIVLWELLTGLTPFENMTPEQAAFAVTHKNARPPLPCDCPWAFSNLINKCWSSNPKKRPHFDEIVTILESYIESLEKDPEFFTNYKPRRPRNLVLKCLPKCNCRHVSSSSKS* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1652 363 PRINTS Tyrosine kinase catalytic domain signature 227 237 IPR001245 GO:0004672|GO:0006468
Ahy1g1652 363 PRINTS Tyrosine kinase catalytic domain signature 143 156 IPR001245 GO:0004672|GO:0006468
Ahy1g1652 363 PRINTS Tyrosine kinase catalytic domain signature 290 312 IPR001245 GO:0004672|GO:0006468
Ahy1g1652 363 PRINTS Tyrosine kinase catalytic domain signature 181 199 IPR001245 GO:0004672|GO:0006468
Ahy1g1652 363 PRINTS Tyrosine kinase catalytic domain signature 246 268 IPR001245 GO:0004672|GO:0006468
Ahy1g1652 363 PANTHER SERINE-THREONINE PROTEIN KINASE 3 341 - -
Ahy1g1652 363 SMART serkin_6 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1652 363 PANTHER SERINE/THREONINE-KINASE HT1-LIKE PROTEIN 3 341 - -
Ahy1g1652 363 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Ahy1g1652 363 Gene3D Transferase(Phosphotransferase) domain 1 147 345 - -
Ahy1g1652 363 CDD STKc_MAP3K-like 72 319 - -
Ahy1g1652 363 Pfam Protein tyrosine and serine/threonine kinase 67 319 IPR001245 GO:0004672|GO:0006468
Ahy1g1652 363 ProSiteProfiles Protein kinase domain profile. 65 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy1g1652 363 SUPERFAMILY Protein kinase-like (PK-like) 54 319 IPR011009 -
Ahy1g1652 363 Gene3D Phosphorylase Kinase; domain 1 55 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1652 Ahy-Chr1 85041033 85046084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1652 38 352 MAP Kinase Kinase Kinase AT1G62400 59.875 3.95e-135 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Ahy1g1652 PK_Tyr_Ser-Thr 5.50E-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1652 - - ahf:112695517 731.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy11g1730 11 109932818 109938466 Ahy1g1652 1 85041033 85046084 hybridization