Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1620 ATGGCTGGTGGTGAAGTTTTGAGGCAGAATTTACCTGAGAAGCTTGAGGAATCTCCTTCTGGTGCAAATGAGCTTCATGTTTTAGCTGTTGATGATAGTCTTGTGGATAGAAAGGTCATTGAACGCTTGCTCAAGATATCTTCTTGCAAAGTGACAGTGGTGGAGAGTGGAACTAGAGCTCTTCAGTATTTGGGGTTGGATGGGGATAAGAAAAGCTCCATTGGATTTGATAGTGTGAAGGTTAATTTGATAATGACTGATTATTCGATGCCGGGGATGACTGGTTATGATCTTCTCAAGAAAATCAAGGAATCGTCTGTTTTTAGAGAGATTCCAGTGGTGATCATGTCATCGGAGAATATCTTGACTAGAATTGATAGATGCTTGGAGGAAGGAGCAGAGGACTTTCTATTAAAGCCGGTGAAGTTATCCGATGTAAGACGCTTAAAAGATTTCATCATGAAGGGTGAAGTGAAGGAAGGAGAGAAAAGATGCTGCAAAAGATCGCGATCTGAAGATTGCAGCCCATCGCCAATGACTCATCCCTGCGATTCATCGCTATTGTCATCGTTGTCTTCGTCTTCAGTACTTTCACCATTGTCACCATCTACCTTGTCCTCCAAGAAATCCAGATTGTGA 639 0.4225 MAGGEVLRQNLPEKLEESPSGANELHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDKKSSIGFDSVKVNLIMTDYSMPGMTGYDLLKKIKESSVFREIPVVIMSSENILTRIDRCLEEGAEDFLLKPVKLSDVRRLKDFIMKGEVKEGEKRCCKRSRSEDCSPSPMTHPCDSSLLSSLSSSSVLSPLSPSTLSSKKSRL* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1620 212 SUPERFAMILY CheY-like 23 149 IPR011006 -
Ahy1g1620 212 Gene3D - 25 174 - -
Ahy1g1620 212 CDD REC_typeA_ARR 27 149 - -
Ahy1g1620 212 Pfam Response regulator receiver domain 27 147 IPR001789 GO:0000160
Ahy1g1620 212 SMART REC_2 25 150 IPR001789 GO:0000160
Ahy1g1620 212 MobiDBLite consensus disorder prediction 167 212 - -
Ahy1g1620 212 MobiDBLite consensus disorder prediction 173 212 - -
Ahy1g1620 212 PANTHER TWO-COMPONENT RESPONSE REGULATOR 9 212 IPR045279 GO:0009736
Ahy1g1620 212 ProSiteProfiles Response regulatory domain profile. 26 154 IPR001789 GO:0000160
Ahy1g1620 212 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 9 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1620 Ahy-Chr1 79121888 79123748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1620 4 168 Response Regulator Gene Family AT3G48100 70.659 4.02e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy1g1620 Response_reg 9.30E-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1620 K14492 - gmx:100796843 292.352