Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1607 ATGTGTAGCACCTTCGCCGCCGCCGCAGACTCCTCCATCTCCGGCGACGGTGACTCCCCCGCCGCCGGCGAGATTATGCTGTTCGGCGTTAGGGTGGTGGTGGACTCCATGAGGAAAAGCGTCAGTATGAACAATCTGTCGCAGTACGTGCATCCTCAAGATGACTCCAACAACAACAAAGACGCTGCCTTCTCCGCCACCGGTTACGCGTCCGCCGACGACGCCGCTCCTCTCAACTCCGGCAAGAACCGCGAGCGCGAGCGCAAGCGAGGTGTTCCCTGGACGGAGGAAGAGCACAAGCTATTCCTGGTGGGATTGCAGAAGGTAGGGAAAGGTGATTGGAGAGGGATCTCTAGGAACTACGTCAAGACTCGGACGCCCACGCAGGTCGCCAGCCATGCTCAGAAGTACTTCCTCCGCCGGAGCAATCTCAACCGCCGTCGGCGCAGATCCAGCCTCTTTGACATCACCACCGATTCGGTCTCTTCGATCCCAATGGAGGAAGAACAGATCCAGAACGGAGACATTGTGCCTCATTCACAGCCTCTGTGCCCTGCAGCCCCTGAGAATAGCAACACCAATGGATTTCCAATGGTGCCCGTGTATCCGTTGGGGGTTGGTCCAGGTGTGATTTCATCAGTCGAAGCTGGGAATCCAATGGATGAACTAACTCTAGGACAGGCAAACATGGAGCTTAATGCGCAAACCAAGCTACTCCATCCGATTCCTGTTGCTTCAAATCCTAAAACCTGCACCGTGTCTGATGTTGCCTCCGGCTCTAATTCGCCCCTCGACTTGCCAACACTGTCCCTGGGACTATCCTTCACATCTGATCAAAGACAGACTCCATCAAGACATTCGGCTTTCCATTCAATTCCGAGTTTAAATAACGGAGATAGCGTCATAAGTGTTGCTTGA 918 0.5458 MCSTFAAAADSSISGDGDSPAAGEIMLFGVRVVVDSMRKSVSMNNLSQYVHPQDDSNNNKDAAFSATGYASADDAAPLNSGKNRERERKRGVPWTEEEHKLFLVGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRRSNLNRRRRRSSLFDITTDSVSSIPMEEEQIQNGDIVPHSQPLCPAAPENSNTNGFPMVPVYPLGVGPGVISSVEAGNPMDELTLGQANMELNAQTKLLHPIPVASNPKTCTVSDVASGSNSPLDLPTLSLGLSFTSDQRQTPSRHSAFHSIPSLNNGDSVISVA* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1607 305 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Ahy1g1607 305 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Ahy1g1607 305 ProSiteProfiles SANT domain profile. 89 142 IPR017884 -
Ahy1g1607 305 PANTHER KIN2 17 305 - -
Ahy1g1607 305 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Ahy1g1607 305 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 17 305 - -
Ahy1g1607 305 SUPERFAMILY Homeodomain-like 88 143 IPR009057 -
Ahy1g1607 305 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Ahy1g1607 305 CDD SANT 93 138 IPR001005 -
Ahy1g1607 305 MobiDBLite consensus disorder prediction 72 92 - -
Ahy1g1607 305 Gene3D - 92 144 - -
Ahy1g1607 305 SMART sant 90 140 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1607 Ahy-Chr1 77916996 77919038 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Ahy1g1607 Myb_DNA-binding 8.50E-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1607 - - aip:107632799 552.362