LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Ahy1g1604	ATGGTGTCGACATCTCAGAAGAAAAGCCTGCACTCTCTAATGGCAGCTAACCTGAGCAAGCTCACCATACCTTGTTCTTCATCATCACCACCTCCAAACAATGAACAGGATTTCGACTTTAACCATGTATTCGGGCACCACCACGACGAACCCTCAGCTGCAATGAGTCCGCACGTGATCCACAGCAGGTCCCACTCCTTTGTGGGCCCCTCCCCTCGCGTGGCCCCACCCTCCAACCCCATCCTCTCCTTCGTCAACGAACTCTCCTCTCAGAGCGAGGGAGAAGAATCCGAACAAGTGCCTCTCAATGTCATCGAAGAAGAGAAAGTGAGCCCTCGAATTGGGCCTGCGGATTTCGAGATTTTGAGGGTTGTTGGTCAGGGTTCATTTGGGAAGGTGTTTCTTGTACGGAAGAAGAAGAAGCAGCAGCATCAAAAGAAAGGGGGCGAAGAAGAGTGCTGTGAAGATGGTGTGTTTGCGATGAAGGTGATGAGGAAGGAGACCATCATCAAGAAGAACCATGTGGATTACATGAAAGCTGAGAGGGATATTCTCACTAAAGTTGTTCATCCTTTCATTGTTCAACTTCGCTACTCTTTCCAGACTAAATCTAAGTTGTATTTGATTTTGGACTTCATAAATGGAGGGCATCTCTTCTTTCATCTCTATCGACAGGGCATCTTCAGTGAGGATCAGGCAAGGATTTACACTGCTGAGATAGTATCTGCTGTTTCACATCTTCACAAGAATGGCATCGTGCACCGGGATCTTAAACCTGAGAACATACTTATGGATGGTGATGGGCATGTGATGCTAACTGATTTCGGATTGTCGAAAGAGATTGACGAATCAGGAAGATCCAACTCTATGTGTGGGACCATGGAATATATGGCTCCGGAAATCATACTGGCCAAAGGCCATAATAAGGATGCAGATTGGTGGAGCATTGGTATTTTGTTGTATGAGATGCTAACAGGGAAGGCACCATTCACACACACGAACAAAAAGAAGCTTCAGGAGAAGATTATTAAAGAGAAAGTTAAACTTCCACCAACGGTTTCCACAGAAGCTCATTCTTTGCTCAAAGGGTTGCTGCAAAAGGATCCATCAACAAGGTTAGGCAACGGGCCAAATGGAGATGAACAGATCAAAAGTCACAAATGGTTTCGACCAATCAATTGGAAGAAATTGGAGGCGAGAGAACTCAAACCTAAGTTCAAACCAGATGTCTCCGGTAAAGAATGTACAGCTAACTTTGACCAATGCTGGACGGCAATGCCTCCAGATGACTCACCAGCTTCCACTCCCACGGCCGGTGACCATTTCCATGGCTACACGTATGTCGCACCAAACCCTTGGCTTTCATCCAAATAG	1374	0.4636	MVSTSQKKSLHSLMAANLSKLTIPCSSSSPPPNNEQDFDFNHVFGHHHDEPSAAMSPHVIHSRSHSFVGPSPRVAPPSNPILSFVNELSSQSEGEESEQVPLNVIEEEKVSPRIGPADFEILRVVGQGSFGKVFLVRKKKKQQHQKKGGEEECCEDGVFAMKVMRKETIIKKNHVDYMKAERDILTKVVHPFIVQLRYSFQTKSKLYLILDFINGGHLFFHLYRQGIFSEDQARIYTAEIVSAVSHLHKNGIVHRDLKPENILMDGDGHVMLTDFGLSKEIDESGRSNSMCGTMEYMAPEIILAKGHNKDADWWSIGILLYEMLTGKAPFTHTNKKKLQEKIIKEKVKLPPTVSTEAHSLLKGLLQKDPSTRLGNGPNGDEQIKSHKWFRPINWKKLEARELKPKFKPDVSGKECTANFDQCWTAMPPDDSPASTPTAGDHFHGYTYVAPNPWLSSK*	458

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Ahy1g1604	457	SUPERFAMILY	Protein kinase-like (PK-like)	118	446	IPR011009	-
	Ahy1g1604	457	PANTHER	RIBOSOMAL PROTEIN S6 KINASE	5	456	-	-
	Ahy1g1604	457	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	252	264	IPR008271	GO:0004672\|GO:0006468
	Ahy1g1604	457	PANTHER	NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE	5	456	-	-
	Ahy1g1604	457	ProSiteProfiles	Protein kinase domain profile.	119	389	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy1g1604	457	Pfam	Protein kinase C terminal domain	410	447	IPR017892	GO:0004674\|GO:0005524\|GO:0006468
	Ahy1g1604	457	ProSiteProfiles	AGC-kinase C-terminal domain profile.	390	457	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Ahy1g1604	457	Pfam	Protein kinase domain	119	389	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Ahy1g1604	457	SMART	pkinase_C_6	390	449	IPR000961	GO:0004674\|GO:0005524\|GO:0006468
	Ahy1g1604	457	Gene3D	Phosphorylase Kinase; domain 1	117	432	-	-
	Ahy1g1604	457	Gene3D	Transferase(Phosphotransferase) domain 1	213	408	-	-
	Ahy1g1604	457	SMART	serkin_6	119	389	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Ahy1g1604	Ahy-Chr1	77566078	77569449	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Ahy1g1604	27	450	AGC Kinase Gene Family	AT3G08720	56.798	1.69e-175	498

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	AGC-Pl	Ahy1g1604		Pkinase	7.20E-71	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Ahy1g1604	K04688		-	gmx:100798259	654.825