Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1553 ATGATATTGGGGAATCTCATTGCTATTACCCAAACAAGCATGAAACGTATGCTTGCGTATTCGTCCATAGGTCAAATCGGATATGTTATTATTGGAATAATTGTTGGAGACTCAAATGGTGGATATGCAAGCATGATAACTTATATGCTGTTCTATATCTCCATGAATCTAGGAACTTTTGCTTGCATTGTATTATTTGGTCTACGTACCGGAACTGATAACATTCGAGATTATGCAGGATTATACACAAAAGATCCTTTTTTGGCTCTCTCTTTAGTCCTATGTCTCTTATCCTTAGGAGGTCTTCCTCCACTAGCAGGTAGGCCTATATTTCTTGGTTTCAATAGGACTCCTTACGAGCGTTGTTTCTATCTACTATTATCTAAAAATAATCAAGTTATTAATGAATTTAGTGAAAACGGAATATATGAACCGCCTGGAGCCCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCGGAATATTTTAGAGATGTTAATGAACAAGACGTGCTTCTATTTATCGACAATATCTTCCGATTCGTCCAAGCGGGATCCGAAGTGTCAGCCTTATTGGGTCGAATGCCTTCCGCTGTAGGTTATCAACCGACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCTATAACTTCTATTCAAGCAGTTTATGTACCCGCAGACGATTTGACCGACCCTGTCCCTGCTACGACATTTGCACATTTGGATGCTACGACCGTACTATCAAGAGGATTGGCTGCCAAAGGTATCTATCCAGCTGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTCGGATTGTTGGTGAAGAACATTATGAAACTGCGCAAAGAGTTAAACAAACTTTACAGCGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGCATCGCTTAACTGTAGCAAGAGCACGGAAAATTGAGCGTTTCTTATCACAGCCTTTTTTCGTAGTAGAAGTATTTACCGGTTCGCCAGGAAAATATGTAGGTCTAGCAGAAACAATTAGAGGGTTTAAATTGATTCTTTCTGGAGAATTAGACGGTCTTCCCGAGCAAGCCTTTTATTTGGTGGGTAATATCGATGAAGCAACTGCGAAGGCTACGAACGTAGAAATGGAGGGGAAATTGAAGAAATGA 1206 0.4013 MILGNLIAITQTSMKRMLAYSSIGQIGYVIIGIIVGDSNGGYASMITYMLFYISMNLGTFACIVLFGLRTGTDNIRDYAGLYTKDPFLALSLVLCLLSLGGLPPLAGRPIFLGFNRTPYERCFYLLLSKNNQVINEFSENGIYEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPVPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEHRLTVARARKIERFLSQPFFVVEVFTGSPGKYVGLAETIRGFKLILSGELDGLPEQAFYLVGNIDEATAKATNVEMEGKLKK* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1553 401 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 141 397 - -
Ahy1g1553 401 TIGRFAM atpD: ATP synthase F1, beta subunit 141 392 IPR005722 GO:0015986|GO:0045261|GO:0046933
Ahy1g1553 401 Gene3D - 278 401 IPR024034 -
Ahy1g1553 401 Pfam Proton-conducting membrane transporter 1 107 IPR001750 -
Ahy1g1553 401 Gene3D - 132 275 IPR027417 -
Ahy1g1553 401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 132 280 IPR027417 -
Ahy1g1553 401 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 278 392 - -
Ahy1g1553 401 CDD ATP-synt_F1_beta_C 282 389 - -
Ahy1g1553 401 PANTHER ATP SYNTHASE 141 397 - -
Ahy1g1553 401 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 143 275 IPR000194 GO:0005524
Ahy1g1553 401 ProSitePatterns ATP synthase alpha and beta subunits signature. 266 275 IPR020003 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1553 Ahy-Chr1 65750296 65753675 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1553 145 339 Primary Pumps ATPases(2) AT1G78900 30.332 6.99e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1553 K02112 - csv:3429375 490.73