Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1528 ATGTCGTTGAATTTGGGCCAAGAGAAAAGGATTTTTAGTTGCTTTTGGCTTTGTGGGTTTCGACTAATTGAGATTGTAAATGGCCTTGATGTTTTGAGCAAATTTGTTGGTGAAACTGAAAAGAATGTAAGGGACCTTTTTACTGATGCTGAACAAGAGCAGAGGAGCCGAGGGGATGAACGTGATTTGCATGTAATTATCTTTGATGAAATCGATGCTATTTGTAAGTCAAGAGGTTCAACTCGCGATGGTATTGGAGTTCATGATAGCATTGTGAACCAGCTTCTTACTAAGATAGATGGTGTGGAGTCGCTAAATAATGTTTTGCTTATTGGAATGACCAACAGAAAGGATATGCTTGACGAGGCTCTCTTAAGCTGCTAG 384 0.3958 MSLNLGQEKRIFSCFWLCGFRLIEIVNGLDVLSKFVGETEKNVRDLFTDAEQEQRSRGDERDLHVIIFDEIDAICKSRGSTRDGIGVHDSIVNQLLTKIDGVESLNNVLLIGMTNRKDMLDEALLSC* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1528 127 Pfam ATPase family associated with various cellular activities (AAA) 21 125 IPR003959 GO:0005524|GO:0016887
Ahy1g1528 127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 19 126 IPR027417 -
Ahy1g1528 127 Gene3D - 8 127 IPR027417 -
Ahy1g1528 127 CDD AAA 19 124 - -
Ahy1g1528 127 PANTHER VESICULAR-FUSION PROTEIN NSF 24 125 IPR039812 GO:0016887|GO:0035494
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1528 Ahy-Chr1 61567585 61573025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1528 26 125 Calmodulin-binding Proteins AT3G56690 42.000 5.53e-19 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1528 K06027 - ahf:112805305 254.988