Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1523 ATGGCGGCGACACCGTCGTCGAACCGTTCCCCCGACGACTTCACCGTCGATCAAACGCCGCTAATCGCGAACTCTAACGGCGGCGGTGGTGGAGGCGAATCGAACTCCGGCCGCAGATTCGTTCGGCGGCAGAGCCTCCGCCAGGCTGCGCGGTTTCTCCGGCAGGGGAGCGGGCGTAGGTCGATGCGGGAGCCGTCGATGGTGGTGAGGGAGACGGCGGCGGCGCAGCTGGAGGAGCGGCAGAGCGATTGGGCGTACTCGAAGCCGGTGGTGGTGCTCGACGTCCTCTGGAACTTCGCGTTCGTGGTGGCAGGCGTCGCTGTGCTAGTCCTGAGCCGGAACGAGTCGCCAAACGCGCCGCTGAGGTTGTGGATCTTAGGGTACGCGGCGCAGTGCATTGTCCACGTGGCGTGCGTGTGCGTTGAGTATCGGAGGAGGAGGAGGAGGACGGAGCAGCAGCAGCAGAGCACGAGCGACGTCGTTCAAGGTGTTGATGGAGTTGGCGTCGGGGGAAGTGGAGATTTAAGCTCCGGTTCCATGGAAGGTTCTGGACACTATTTGACATTGGCTCAATTCGATGAGGACGGCACAAGCATGGCAAAGCATTTGGAATCAGCCAACACAATGTTTTCCTTTATTTGGTGGGTTGTTGGGTTCTATTGGGTATCAGCTAGTGGTCAAGACTTAACCCAAGAGGCTCCTCTGCTTTATTGGTTATGTATAGTCTTCCTGGGTTTCGATGTTTTCTTTGTCGTTTTCTGCATTGCACTGGCATGCATCATTGGTATTGCTGTTTGCTGTTGTCTTCCGTGCATCATTGCACTTCTATATGCAGTTGCAGACCAGGAAGGGGCATCCAAAGAAGATATTGAGCAGTTGTCGAAATTCAAATTCCAAAGGAATGAAAACAATGAGAAACTCACTGATAATACACAAGGATCTGCTGGGGGAGTAATGATAGAATGCCGAGTTGATTCACCTATTGAACATGTTCTTTCTGACGAGGATGCGGAATGTTGCATCTGCCTTTCTGCTTATGAGGATGGTGTTGATCTAAGACAACTTCCCTGTGGTCACCATTTTCACTGTGCTTGTGTGGACAAATGGCTATACATTAATGCTACCTGCCCCCTCTGCAAGTATAATATCCTAAAAAGTAGCAGAAGTGCTCAAGAGGAAGTGTAG 1185 0.5283 MAATPSSNRSPDDFTVDQTPLIANSNGGGGGGESNSGRRFVRRQSLRQAARFLRQGSGRRSMREPSMVVRETAAAQLEERQSDWAYSKPVVVLDVLWNFAFVVAGVAVLVLSRNESPNAPLRLWILGYAAQCIVHVACVCVEYRRRRRRTEQQQQSTSDVVQGVDGVGVGGSGDLSSGSMEGSGHYLTLAQFDEDGTSMAKHLESANTMFSFIWWVVGFYWVSASGQDLTQEAPLLYWLCIVFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALLYAVADQEGASKEDIEQLSKFKFQRNENNEKLTDNTQGSAGGVMIECRVDSPIEHVLSDEDAECCICLSAYEDGVDLRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSSRSAQEEV* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1523 394 MobiDBLite consensus disorder prediction 1 40 - -
Ahy1g1523 394 SMART ring_2 339 379 IPR001841 -
Ahy1g1523 394 Pfam Ring finger domain 338 380 IPR001841 -
Ahy1g1523 394 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 3 394 - -
Ahy1g1523 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 323 387 IPR013083 -
Ahy1g1523 394 ProSiteProfiles Zinc finger RING-type profile. 339 380 IPR001841 -
Ahy1g1523 394 CDD RING-H2_RNF111_like 338 382 - -
Ahy1g1523 394 PANTHER TARGET OF ERK KINASE MPK-1 3 394 - -
Ahy1g1523 394 SUPERFAMILY RING/U-box 328 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1523 Ahy-Chr1 60986570 60990824 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1523 42 385 C3H Transcription Factor Family AT1G68070 50.571 5.08e-116 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1523 - - ahf:112722254 711.449