Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1515 ATGGCGTCACTTCACACCACCACTACAGCCTCATTCCCTTCCATCCAAACCCCAAGATCCCTCCTCACCCACCCAAAACCCATCCTCAACCTCTCCCTCTCCACTACTACCTTCCCCTCCCTCTCCCTCAAACTCACCCGCCCCCGCCGCTCCGCCGGAGCCCTCGGCGCCCGCATGGTCTCCACCGCTGCCGCAAGCTACGCCCTCGCCCTCGCCGACGTCGCCAAATCCAACAACACCCTTGACGCCACCACAACCGACATCGAGAAAATCGATGAAATCTTCTCCGATCCACAGGTGTTCAAATTCTTCGCCAACCCAACCGTAGATGCCGAACGGAAGAAGAATCTCGTCGATGAAATTGCCACGTCATCAAGCTTCCAATCCCACACGCGCAACTTCCTGAACATTCTGGTCGATGCGAAGCGCATTGGGCTGGTGAAGGAGATTGCGAAGGAGTATGAATTCGTGTACAACACGCTCACAGATACGGAAATGGCGGTGGTGAGCTCGGTGGTGAAGCTCGAGTCGCAGCACTTAGCACAGATCGCGAAGCAGGTGCAGAAGCTAACGGGGGCTAAGAACGTTAGAATCAAGACAGTTATTGACCCGAGCCTGGTGGCTGGGTTTACTGTTAGGTATGGTAATTCTGGATCGAAGTTGATTGATATGAGCGTCAAGAAGCAGCTTGAGGAGATTGCTGCTCAGCTTGATTTGGGTGACATCAAACTCAATTGTGCTGGAGATGAAAATGGATATATGATATTGGATAGGTCATGCAAAATTGGAATGATGGTCTTGTCCCGCCCACGATGA 816 0.5294 MASLHTTTTASFPSIQTPRSLLTHPKPILNLSLSTTTFPSLSLKLTRPRRSAGALGARMVSTAAASYALALADVAKSNNTLDATTTDIEKIDEIFSDPQVFKFFANPTVDAERKKNLVDEIATSSSFQSHTRNFLNILVDAKRIGLVKEIAKEYEFVYNTLTDTEMAVVSSVVKLESQHLAQIAKQVQKLTGAKNVRIKTVIDPSLVAGFTVRYGNSGSKLIDMSVKKQLEEIAAQLDLGDIKLNCAGDENGYMILDRSCKIGMMVLSRPR* 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1515 271 Pfam ATP synthase delta (OSCP) subunit 64 237 IPR000711 GO:0015986|GO:0046933
Ahy1g1515 271 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 59 162 IPR026015 -
Ahy1g1515 271 TIGRFAM ATP_synt_delta: ATP synthase F1, delta subunit 64 237 IPR000711 GO:0015986|GO:0046933
Ahy1g1515 271 PRINTS ATP synthase delta subunit signature 63 82 IPR000711 GO:0015986|GO:0046933
Ahy1g1515 271 PRINTS ATP synthase delta subunit signature 132 143 IPR000711 GO:0015986|GO:0046933
Ahy1g1515 271 PRINTS ATP synthase delta subunit signature 212 230 IPR000711 GO:0015986|GO:0046933
Ahy1g1515 271 PRINTS ATP synthase delta subunit signature 143 157 IPR000711 GO:0015986|GO:0046933
Ahy1g1515 271 PRINTS ATP synthase delta subunit signature 194 209 IPR000711 GO:0015986|GO:0046933
Ahy1g1515 271 PANTHER BNACNNG66500D PROTEIN 49 245 - -
Ahy1g1515 271 Hamap ATP synthase subunit delta [atpD]. 59 239 IPR000711 GO:0015986|GO:0046933
Ahy1g1515 271 Gene3D - 63 155 IPR026015 -
Ahy1g1515 271 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 196 215 IPR020781 GO:0015986|GO:0016020|GO:0046933
Ahy1g1515 271 PANTHER ATP SYNTHASE DELTA CHAIN 49 245 IPR000711 GO:0015986|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1515 Ahy-Chr1 60313607 60315377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1515 40 244 Primary Pumps ATPases AT4G09650 68.269 3.33e-100 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1515 K02113 - jre:108995257 305.449