Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1501 ATGGCCACTTTCACGTTTTCATTGTGCCCTCACACCCTCTGTTACCGCCCTTACACCACACGCTCTTCTTCCCTTTCTTGCTCTTTCCCCTCTTCTGCTCTCCCAGATAATGTTGGATCTGAAGTACCGAGAAAACGAATAAGAAGAATAGAAGGTCCAAGAAAGAGCATGGAAGACTCTGTTAAACGTAAGATGGAGCAATTTTATGAGGGATCCGATGGACCACCCATCCGTGTTCTTCCTATTGGTGGATTAGGTGAAATTGGAATGAATTGCATGCTTGTTGGTAACTATGACCGCTACATTCTCATTGATGCTGGTGTCATGTTTCCAGACTATGATGAGCTTGGGGTCCAAAAAATCATACCCGATACAACATTCATAAAAAAATGGAGCCACAAAATTGAGGCAGTTGTTATAACACATGGGCATGAAGATCATATCGGTGCGTTACCTTGGGTCATCCCAGCATTGGATTCTCATACGCCAATTTTTGCATCATCCTTCACAATGGAGCTTATTAAGAAACGCTTGAAGGAACATGGTATTTTTGTTCCATCCAGACTCAAAGTATTTAGAACAAGGAAGAAGTTTATGGCAGGGCCTTTTGAGATAGATCCAATCACGGTGACCCATTCTATTCCTGATTGCTGTGGTTTAGTACTTCGTTGTTCTGATGGGACTATTCTTCACACCGGGGACTGGAAGATTGATGAAACACCATTAGACGGTAAAGTTTTCGATCGTGAAGCTCTAGAGGAGCTCTCTAAAGAAGGAGTAACATTGATGATGAGCGATTCAACAAATGTACTCTCACCTGGAAGGACAACCAGTGAATCTGTCGTGGCAGATGCATTGTTGAGGCATATTTCAGCTGCTAAAGGAAGGGTTATTACGACTCAGTTTGCATCAAATATACATCGTCTGGGAAGCATCAAAGCTGCTGCTGATTTAACTGGTAGAAAGCTGGTATTTGTTGGCATGTCTTTAAGGACATACTTAGATGCAGCTTGGAAAGATGGAAAGGCTCGAATTGATCCATCCACTTTGATTAAAGCGGAGGATATTGATGCTTATGCTCCAAAGGATTTGCTAATTGTTACAACAGGCTCCCAAGCAGAACCTCGTGCGGCCTTGAATCTTGCGTCTTATGGAAGTAGTCATTCTTTCAAACTAACAAAGGAAGATGTTGTTTTGTATTCAGCTAAGGTTATCCCTGGCAATGAGTCCCGTGTTACAGACATGCTAAACCGCATATCAGAAATTGGATCAACAATAGTTATGGGGAAGAATGAATATCTGCACACGTCTGGTCATGGGTATCGCGGAGAATTGGAAGAAGTACTTAGAATTGTGAAACCACAGCATTTTCTTCCCATACATGGGGAACTCTTGTTCTTGAAAGAACATGAATTGCTTGGAAAGTCCACTGGCATTCGACACACCACTGTTGTTAAGAATGGAGAGATGCTTGGTGTTTCACATTTGAGAAATAGAAGAGTCCTTTCTAATGGCTTCATTTCACTTGGAACAGAAAATTTGCAGTTGAAGTATAGTGATGGTGACAAAGCATTTGGTACATCGAATGATCTCCTTATTGATGAAAGAATGAGAATTGCATTAGATGGCATCATTGTGGTTAGCATGGAAATATTCCGCCCTCAAAATCTAGATGATCAAGTTGGAAACACATTGAAAGGCAAGATAAGAATTACTACAAGATGCCTGTGGCTTGACCAAGGGAAGCTGATGGATGCACTTCATAAAGCTGCGAATGCTGCCCTTTCAAGCTGCCCTGTAAACTGTCCACTGGCTCACATGGAAAGAATTGTGTCTGAGGTGCTGAGGAAAATGGTGAGGAAGTATAGTGGAAAGCGGCCTGAAGTTATTGCCATTGCTGTAGAAAATCCTGCAGCTGTTATTGAAGATGAGGTAAAGACAAAGTTGTCTGGCAAAGCCCATGTGGATGGGATATCAACATGGAGAAGAGTGTTAGATGGGCATGGGAAGGAAAATAACTCCACTAAAATGCAAATTAGAGGTGTTGAAGGATTAGCATCTGAAGAATACACTACCACCTCAAGTGGAGATGATGATGATATTTCTGAAACAGAGGATCAAGATGAATTTTGGAAGTCATTCGTCGATTCATCGTCAGCTGAGAAGTCAATCAAAGCTAACAATGGTTATGTTCCTCAAAAGGAGAATAAGCCCCAACTGAAGAAAGATAGTTCTGAAGAGTCTGAAGAAGAAATGTCCGAAACATCAAATTTAGAATCCAAATATTCAAAATCTGCAAAGAGAAATAAATGGAAACCTGAGGAAATTAAGAAGCTGATTGATATGCGGGGTGAACTACATGATCGATTCCAAGTAGTAAAGGGGAGGATGGCCCTTTGGGAAGAAGTATCTCAGAACTTGTCGGCAAATGGGATCAGCAGAAGTCCTGGGCAGTGCAAATCTCTATGGACATCTTTGTTACAGAAATATGAGGAGGTCAAGAATGAGAAGAATACCAAGAAAAAGTGGTCATATCTTGAGGACATGGAGAGGATTCTATCTGAAAATGAGGAACTGGCAACAAAATGA 2589 0.4144 MATFTFSLCPHTLCYRPYTTRSSSLSCSFPSSALPDNVGSEVPRKRIRRIEGPRKSMEDSVKRKMEQFYEGSDGPPIRVLPIGGLGEIGMNCMLVGNYDRYILIDAGVMFPDYDELGVQKIIPDTTFIKKWSHKIEAVVITHGHEDHIGALPWVIPALDSHTPIFASSFTMELIKKRLKEHGIFVPSRLKVFRTRKKFMAGPFEIDPITVTHSIPDCCGLVLRCSDGTILHTGDWKIDETPLDGKVFDREALEELSKEGVTLMMSDSTNVLSPGRTTSESVVADALLRHISAAKGRVITTQFASNIHRLGSIKAAADLTGRKLVFVGMSLRTYLDAAWKDGKARIDPSTLIKAEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGSSHSFKLTKEDVVLYSAKVIPGNESRVTDMLNRISEIGSTIVMGKNEYLHTSGHGYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTTVVKNGEMLGVSHLRNRRVLSNGFISLGTENLQLKYSDGDKAFGTSNDLLIDERMRIALDGIIVVSMEIFRPQNLDDQVGNTLKGKIRITTRCLWLDQGKLMDALHKAANAALSSCPVNCPLAHMERIVSEVLRKMVRKYSGKRPEVIAIAVENPAAVIEDEVKTKLSGKAHVDGISTWRRVLDGHGKENNSTKMQIRGVEGLASEEYTTTSSGDDDDISETEDQDEFWKSFVDSSSAEKSIKANNGYVPQKENKPQLKKDSSEESEEEMSETSNLESKYSKSAKRNKWKPEEIKKLIDMRGELHDRFQVVKGRMALWEEVSQNLSANGISRSPGQCKSLWTSLLQKYEEVKNEKNTKKKWSYLEDMERILSENEELATK* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1501 862 MobiDBLite consensus disorder prediction 736 767 - -
Ahy1g1501 862 Gene3D - 81 493 IPR036866 -
Ahy1g1501 862 SMART Lactamase_B_5a 89 286 IPR001279 -
Ahy1g1501 862 CDD GT1 769 834 - -
Ahy1g1501 862 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 430 475 IPR011108 -
Ahy1g1501 862 MobiDBLite consensus disorder prediction 666 708 - -
Ahy1g1501 862 ProSiteProfiles Myb-like domain profile. 763 827 IPR001005 -
Ahy1g1501 862 Pfam Beta-lactamase superfamily domain 100 236 IPR001279 -
Ahy1g1501 862 PANTHER RNA-METABOLISING METALLO-BETA-LACTAMASE 5 862 - -
Ahy1g1501 862 MobiDBLite consensus disorder prediction 723 767 - -
Ahy1g1501 862 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Ahy1g1501 862 Gene3D - 278 428 IPR042173 -
Ahy1g1501 862 PANTHER RIBONUCLEASE J 5 862 - -
Ahy1g1501 862 Gene3D - 771 832 - -
Ahy1g1501 862 Pfam Myb/SANT-like DNA-binding domain 768 852 IPR044822 -
Ahy1g1501 862 CDD RNaseJ_MBL-fold 80 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1501 Ahy-Chr1 58652651 58661271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1501 753 854 Trihelix Transcription Factor Family AT2G38250 29.808 1.07e-08 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy1g1501 Lactamase_B_2 4.00E-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1501 - - gmx:100814619 1422.91