Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1486 ATGTCTTCTAATTATCCAAATAGTTGCGGCTTCAAACGCGAGTTCAACAGCGATGAAATAAGCCCTATAATGGTGCAGGATCCTTCTTGCATAATCTTCTATTCCTGTCCCAACCTATCCGACTTGGATGATACTACTACTCCTTTCTATACAGTAAAAGACCGTTTTAGCCCCGAAGAGAAAAGAATCTTGGAGAATACTTTCATCCACTGGAGCCACACTATAAGCTCTTCTTTGGATGAAATTTCACAAACCAAAAGGCTGAGAAGAACCACAAGCATCCCAATTTCTCTAGAAAATCTCTCAATAAACCCGATTTATGGCTCGAATTATAATAAAAATAGCATCCAAACGCACATCAGAGATCACATAAAAAGTTGTTCGCAGATGTACCGCGCTGCCGAGGCAGTTGAAGAGGCAGCACAAGACATGATTAATTCGGAAGGCGGCGGAGAAGATGGCTGCGATGGAATGAGGCTTGTTCAACTGCTAATCTCTTGCGCCGAGGCCGTTGCGTGTCGTGACAAATCGCACGCTTCGATACTTCTATCAGAACTCAAGTCTAGCGCCTTGGTTTTCGGCACCGCCTTCCAGCGAGTAGCGTCCTGCTACGTGCAGGGCTTGTCCGAGCGATTGTCTTTGATTCAGCCGTGTTTTGGTCCGGTGGCGGTGGCGCAACCAATGATGAACATAATGGACGCCGCTTCGGAGAAGATGGAAGAAGCGTTCAGGCTGGTGTATGAAATCTGTCCACATATTCGATTCGGACATTTCGTGGCAAATTCCGCGATAGTGGAAGCCTTTGAGGGTGAGAGTCTTGTCCATGTGGTAGACCTCGGCATGAGCCTAGGCCTATCACATGGTCACCAATGGAGGGGCCTGATCCAATCCTTGGCCAACCGCTCCGGGGCCTGTGTTCGCAGGCTCCGGATCACCGCGGTTGGTCTCTGTATTGGCAGATTCCGGATCATTGGTGATGAACTCTCTGTTTACGCGAATAGCATGGGAATCAACTTTGAATTCTCCGTTGTGCAGAAGAATCTAGAGAATCTAAAACCTGAAGATGTCATAAAAGAAGATAATGAGGTTCTTGTGGTGAATAGTATCCTTCAGTTGCATTGTGTTGTTAAAGAAAGCCGTGGCGCTTTGAACTCTGTGCTTCAGATGATTCACGGGCTTTCGCCAAAGGTATTGGTTATGGTTGAGCAGGATTCGAGTCACAATGGACCGTTTTTTCTTGGAAGGTTTATGGAATCTTTGCATTACTACTCTGCAATATTTGATTCGCTTGATGCAATGTTGCCCAAGTATGATACGAAGAGAGCGAAGATGGAGCAGTTTTACTTTGCTGAGGAGATAAAGAACATTGTGAGCTGTGAGGGGCCGCTTCGGATGGAGCGGCACGAGAGGGTGGACCAGTGGCGGAGGAGGATGAGCCGGGCGGGGTTCCAGGGTTCGCCGATTAAGATGGTGGCGCAGGCAAAGCAGTGGCTTGTGAAGAACAAGGTTTGTGATGGATATACTGTTGTGGAAGAGAAAGGGTGCTTGGTTCTTGGTTGGAAATCAAAGCCTATTGTTGCAGCTTCTTGTTGGAAGTGTTGA 1602 0.4732 MSSNYPNSCGFKREFNSDEISPIMVQDPSCIIFYSCPNLSDLDDTTTPFYTVKDRFSPEEKRILENTFIHWSHTISSSLDEISQTKRLRRTTSIPISLENLSINPIYGSNYNKNSIQTHIRDHIKSCSQMYRAAEAVEEAAQDMINSEGGGEDGCDGMRLVQLLISCAEAVACRDKSHASILLSELKSSALVFGTAFQRVASCYVQGLSERLSLIQPCFGPVAVAQPMMNIMDAASEKMEEAFRLVYEICPHIRFGHFVANSAIVEAFEGESLVHVVDLGMSLGLSHGHQWRGLIQSLANRSGACVRRLRITAVGLCIGRFRIIGDELSVYANSMGINFEFSVVQKNLENLKPEDVIKEDNEVLVVNSILQLHCVVKESRGALNSVLQMIHGLSPKVLVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDAMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQGSPIKMVAQAKQWLVKNKVCDGYTVVEEKGCLVLGWKSKPIVAASCWKC* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1486 533 ProSiteProfiles GRAS family profile. 151 532 IPR005202 -
Ahy1g1486 533 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 110 532 IPR005202 -
Ahy1g1486 533 PANTHER DELLA PROTEIN RGL1-LIKE 110 532 - -
Ahy1g1486 533 Pfam GRAS domain family 160 532 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1486 Ahy-Chr1 55325893 55327795 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1486 157 533 GRAS Transcription Factor Family AT1G66350 38.058 1.06e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Ahy1g1486 GRAS 6.20E-107 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1486 - - adu:107491113 1073.54