Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1480 ATGAAGAAGCTCACTGCAATTGTTTCCATTTTCGTGATCTTAACATTCTCTTTTCATGAAATTGCGTATGTTTCTTCATCTCCTCTCTTACACCACGCAAAACAGGTTCACGAAGAGAAATCTTCTACTGTAAGAAATCTTGAACAGGATCAAAAGCATGCTGGTGAAGTGCATTGCTCTAGGGAAAGAAGTAGGGCAGCTCGGAAAGTGATAGAACAGTACTTGACACCGTTTGTTGAGCGAGAAAACTATCATTTTTCAAGAAACTGTAGACTTCACCCTGAAAATGATATATTCAGGGATCAGGAGGAGCATAAAATTTTCGTAGACAGGCATGATTGGCGGTGTGGATATTGTAGAAAAGTTTTCCGTGAAGAAAAATTTCTTGATCAGCATTTTGATAACAGGCACTCCAATCTTCTGAATGTAAGTCATGATAATTGCTTGGCTGATTTATGTGGAGCATTGCATTGTGATGCTGTTATGAATTCCAAGTTCTCTAGAACTAAGTGTTATCCAGCAGCTGCTGCAAAAAACCGTCACCTATGTGAGAGTCTTGCTGACAGTTGCTTTTCCATAAGCCAGGGGCCATCAGCAAGCTGTCTTCATGAATTGTTTATACACCAGTTTTGTGATGCTCACACCTGCTCAGGGAAACAGAAGCCCTTCTCTAGAGGAGGCAAGGAGCAAAGTAGTTTCTTCCGCCTGGCTGCTGGAGCATTGATCTTGGTGCTACTTCCTGTGTTCTATCTTTTTCTTTATCTTGTTCAAAGTTGCAGTGATATGAAGGGTCGAACTCAGGAGCTTCGTCGCATCTCAAAAGCAGGATGGAAAGTCAAACCATCATGA 849 0.4146 MKKLTAIVSIFVILTFSFHEIAYVSSSPLLHHAKQVHEEKSSTVRNLEQDQKHAGEVHCSRERSRAARKVIEQYLTPFVERENYHFSRNCRLHPENDIFRDQEEHKIFVDRHDWRCGYCRKVFREEKFLDQHFDNRHSNLLNVSHDNCLADLCGALHCDAVMNSKFSRTKCYPAAAAKNRHLCESLADSCFSISQGPSASCLHELFIHQFCDAHTCSGKQKPFSRGGKEQSSFFRLAAGALILVLLPVFYLFLYLVQSCSDMKGRTQELRRISKAGWKVKPS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1480 282 ProSitePatterns Zinc finger C2H2 type domain signature. 116 137 IPR013087 -
Ahy1g1480 282 ProSiteProfiles Zinc finger C2H2 type domain profile. 114 139 IPR013087 -
Ahy1g1480 282 PANTHER ZINC FINGER PROTEIN-RELATED 7 282 - -
Ahy1g1480 282 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 7 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1480 Ahy-Chr1 54851893 54856055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1480 38 282 C2H2 Transcription Factor Family AT5G63280 60.408 1.28e-100 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1480 - - ccaj:109814494 440.269