Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1466 ATGACAACCACTTCCCTTCTCTTTCTCTTTCTCTTCTCTCTCCTCTTCCCGGCCCTCATTTCCTCTTCCCCTGTCCAAGACCCTGAATTGGTAGCTCAAGAAGTGACCAGGCAAATCAATGCGTCTGTTGCTAGGAGGAACTTGGGGTACTTGTCTTGCGGGACAGGTAACCCAATCGACGACTGTTGGAGGTGTGATCCGAATTGGGAGAAGAACAGACAGAGGCTTGCAGACTGCGCTATCGGCTTCGGGAAGAACGCCATTGGCGGAAGGGACGGAAAAATCTACGTGGTGACTGATTCTGCTGATGACAACCCAGTGAACCCCAAGCCGGGGACGCTTCGCTATGCAGTGATTCAGGACGAGCCCCTATGGATCATATTCGCAAGGGACATGGTGATTCAGTTGAAGGAAGAACTTATAATGAACTCCTTCAAGACCATAGATGGGAGAGGTGCTAGCGTGCACATTGCTGGTGGACCATGCATAACAATTCAGTATGTGAATAACGTTATAATACATGGTATTCACATACATGATTGTAAGCAAGGTGGGAATGCTATGGTGCGTGACTCCCCACGGCACTACGGGTGGAGGACTCTATCGGACGGTGATGGGGTCTCCATATTTGGCGGGAGCCACGTGTGGGTTGATCATTGCTCCTTGTCTAACTGCAGGGACGGTTTGATTGATGCCATTCACGGCTCCACCGCAATTACAATTTCTAACAATTACATGACGCACCATGATAAGGTTATGTTGTTGGGTCATAGTGATACATATACACAAGACAAGAATATGCAGGTTACTATTGCTTTTAACCACTTCGGTGAAGGCCTTGTTCAGAGAATGCCAAGGTGTAGGCATGGGTATTTCCATGTGGTGAACAATGACTACACACACTGGGAAATGTATGCCATTGGTGGAAGTGCCAACCCAACCATCAATAGCCAAGGCAACAGATTTGTAGCACCAAATGACAGGTTCAGCAAAGAGGTGACAAAGCATGAGGATGCACCAGAGAGTGAATGGAGGGGTTGGAATTGGAGGTCAGAAGGGGACTTATTGGTAAATGGTGCATTTTTCACTGCATCTGGTGCTGGAGCCTCTTCAAGTTATGCAAGGGCTTCAAGTTTGAGTGCAAGACCATCCACTCTTGTGGGCACTATAACAACTGGTGCAGGTGCACTCGTTTGTAAGAGGGGTTCTCGTTGCTGA 1218 0.4819 MTTTSLLFLFLFSLLFPALISSSPVQDPELVAQEVTRQINASVARRNLGYLSCGTGNPIDDCWRCDPNWEKNRQRLADCAIGFGKNAIGGRDGKIYVVTDSADDNPVNPKPGTLRYAVIQDEPLWIIFARDMVIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVNNVIIHGIHIHDCKQGGNAMVRDSPRHYGWRTLSDGDGVSIFGGSHVWVDHCSLSNCRDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDTYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRFVAPNDRFSKEVTKHEDAPESEWRGWNWRSEGDLLVNGAFFTASGAGASSSYARASSLSARPSTLVGTITTGAGALVCKRGSRC* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1466 405 PRINTS Pollen allergen Amb family signature 305 324 IPR018082 -
Ahy1g1466 405 PRINTS Pollen allergen Amb family signature 79 96 IPR018082 -
Ahy1g1466 405 PRINTS Pollen allergen Amb family signature 139 155 IPR018082 -
Ahy1g1466 405 PRINTS Pollen allergen Amb family signature 203 224 IPR018082 -
Ahy1g1466 405 PRINTS Pollen allergen Amb family signature 376 399 IPR018082 -
Ahy1g1466 405 PRINTS Pollen allergen Amb family signature 103 128 IPR018082 -
Ahy1g1466 405 PRINTS Pollen allergen Amb family signature 347 371 IPR018082 -
Ahy1g1466 405 PRINTS Pollen allergen Amb family signature 283 302 IPR018082 -
Ahy1g1466 405 Gene3D - 56 398 IPR012334 -
Ahy1g1466 405 PANTHER PECTATE LYASE 18-RELATED 4 402 IPR045032 GO:0030570
Ahy1g1466 405 SMART amb_all 131 328 IPR002022 -
Ahy1g1466 405 PANTHER PECTATE LYASE 4 402 - -
Ahy1g1466 405 SUPERFAMILY Pectin lyase-like 38 399 IPR011050 -
Ahy1g1466 405 Pfam Pectate lyase 139 322 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1466 Ahy-Chr1 53873126 53875442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1466 5 405 Polysaccharide Lyase AT5G63180 82.134 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1466 K01728 - gmx:100101868 744.191