Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1444 ATGGCGGTCCACGACGGAGGAGAACGCGGGATTGAACGGCATGGAAGCACAGATCGAGATCTGGCTGTCTCGAGGTTCACAATAAGGGAAGAAAATGGATCACACAGGGCAACGAGATTCACAGGAGAGGATGCTGATGATGGAATGAGCGGCAAAACTTTGCCGGTAGAGAAAGCAGAAGTGATGGATTCGTCCGCCGCAGATGCGGACATAGATGCAGAAGCAGCAGTGAGGATTGTTGATGGGATAGGGTACTTTGGCGCCATTGAATTTTCTACCCTGACAGCCAAGGACGTCCTTACGACGGAGTTCACAAGTCTACAGGGAGCTTATGACTACTACAACGAATACGATCGCATCAAGGGAATTTCGGTTAGGAGGTCCAAGGTGGGTCACAGAACAAAGCAGGGGGCGGAGGGCGAAATCATTTGGCAGATATTTGTGTGCTCGAGGGAAGGAGAGCGAGACGGGAAACACATGCAGCGGGAAGACAGGAAGATGGATCCTCAACCGATCACGCGGTGCGGGTGTGAAGCCCGGATTAAGGTCCACGTCGATGATGCCATCAGGCGATGGTTTGTTGAACAATTATGCGATAACCATAATCATCCCATGCTGGATGCGAGGTTCAAGGGTCTGTCGCGGTCACACAGAGCAGTCAAGGAAGGCGATTTGCACCAAATCAATTCCATGAGAAAATCCGGGTTGCGGGTGCCGACGATTTTCCGCGCCTTTGCCAATCAGTCAGGAGGATTCGAGACTGTTGGGTTCGAGATAAAGGACATATATAATGCGATAGAGAAGCAAAGGCGGAAGTACTCGTTGGCTGTTGGCAAGAGGCTGGAAAATCTCTTCTGGTGCGATGGTACAAGTTGTTATGACTACAGTGTATTCGGGGATGTCCTGGGTTTTGATGCAACGTACGGTCATAACAAATACAAGTGCCCTTTGGTAATATTCTCAGGGGTGGACCATCATATAAGGACGGTGGTGTTTGGCTGCGCCATCTTGAGCAACGAGAGTGAAGGAAGCTATGTGTGGTTGTTGTGGTCATTTCTTGAGGCAATGAAAGGAAAACAGTCGAAGTCTGCCATCACGGACGGGGATCTCACCATAAAGAGTGCGGTTAGCACAGTTTTCCCTGGTGCACATCACAGGCTGTGTAGCTAG 1170 0.5034 MAVHDGGERGIERHGSTDRDLAVSRFTIREENGSHRATRFTGEDADDGMSGKTLPVEKAEVMDSSAADADIDAEAAVRIVDGIGYFGAIEFSTLTAKDVLTTEFTSLQGAYDYYNEYDRIKGISVRRSKVGHRTKQGAEGEIIWQIFVCSREGERDGKHMQREDRKMDPQPITRCGCEARIKVHVDDAIRRWFVEQLCDNHNHPMLDARFKGLSRSHRAVKEGDLHQINSMRKSGLRVPTIFRAFANQSGGFETVGFEIKDIYNAIEKQRRKYSLAVGKRLENLFWCDGTSCYDYSVFGDVLGFDATYGHNKYKCPLVIFSGVDHHIRTVVFGCAILSNESEGSYVWLLWSFLEAMKGKQSKSAITDGDLTIKSAVSTVFPGAHHRLCS* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1444 389 Pfam FAR1 DNA-binding domain 112 206 IPR004330 -
Ahy1g1444 389 PANTHER OS02G0262500 PROTEIN 273 389 - -
Ahy1g1444 389 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 98 266 IPR031052 GO:0006355
Ahy1g1444 389 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 273 389 IPR031052 GO:0006355
Ahy1g1444 389 PANTHER OS02G0262500 PROTEIN 98 266 - -
Ahy1g1444 389 Pfam MULE transposase domain 301 388 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1444 Ahy-Chr1 51654377 51668648 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy1g1444 FAR1 2.60E-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1444 - - adu:107488784 777.319