Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy1g1443 ATGGCTGCTTCTGCTTCTTCTTCTTTGTCTTCATCTTCTAAGAAGGATTCAGTGTACCGCGGAATCCGGTGCCGAGGAGGGAAATGGGTATCCGAGATCCGAGAGCCGAGAAAGACGACCCGAATATGGCTCGGCACCTTTCTGAAGCCGGAGATGGCTGCGGCAGCCTATGACGTGGCAGCACTGGCACTCAAGGGTGCAGAAGCACCCTTGAACTTCCCTGCCATGGTAGGGAAGTATCCAATGCCAGCGTCTAGTTCCGCAGCTGACATCCGCAGCGCTGCCACCGCCGCGGCGCAGCTGATTATGGCTGAACTTGCATCACCAACCAACAATAATGCAGTTCAGCCTAATATTGATAATGAAAACAATAATAATAATAATAATAATAATAATAATAATGATAATGACAACAATAACACTAATAATGATAGTGCTGCTCCTTTGTATGATGATGGACCGGTTGAGTTTTTGGACGAAGAAGCAATTTTCTCCTTGCCGAGTTTGCTGGTCGATATGGCAGAGGGAATGCTGCTTTCTCCACCCAGAATGAGTCCGTCGTCGCCCGACTCGCCGGAAAATTATTCCGGCGGAGGAGACAGTTTGTGGAACTACTAA 618 0.4838 MAASASSSLSSSSKKDSVYRGIRCRGGKWVSEIREPRKTTRIWLGTFLKPEMAAAAYDVAALALKGAEAPLNFPAMVGKYPMPASSSAADIRSAATAAAQLIMAELASPTNNNAVQPNIDNENNNNNNNNNNNNDNDNNNTNNDSAAPLYDDGPVEFLDEEAIFSLPSLLVDMAEGMLLSPPRMSPSSPDSPENYSGGGDSLWNY* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy1g1443 205 SMART rav1_2 18 80 IPR001471 GO:0003700|GO:0006355
Ahy1g1443 205 PRINTS Ethylene responsive element binding protein signature 56 76 IPR001471 GO:0003700|GO:0006355
Ahy1g1443 205 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Ahy1g1443 205 MobiDBLite consensus disorder prediction 178 205 - -
Ahy1g1443 205 MobiDBLite consensus disorder prediction 189 205 - -
Ahy1g1443 205 CDD AP2 17 75 IPR001471 GO:0003700|GO:0006355
Ahy1g1443 205 SUPERFAMILY DNA-binding domain 17 75 IPR016177 GO:0003677
Ahy1g1443 205 Pfam AP2 domain 17 66 IPR001471 GO:0003700|GO:0006355
Ahy1g1443 205 Gene3D AP2/ERF domain 18 76 IPR036955 GO:0003700|GO:0006355
Ahy1g1443 205 MobiDBLite consensus disorder prediction 112 147 - -
Ahy1g1443 205 PANTHER ETHYLENE RESPONSE FACTOR 6 205 - -
Ahy1g1443 205 ProSiteProfiles AP2/ERF domain profile. 18 74 IPR001471 GO:0003700|GO:0006355
Ahy1g1443 205 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 205 - -
Ahy1g1443 205 MobiDBLite consensus disorder prediction 112 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy1g1443 Ahy-Chr1 51620902 51622092 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy1g1443 5 205 AP2-EREBP Transcription Factor Family AT5G52020 48.780 1.79e-46 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Ahy1g1443 AP2 1.20E-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy1g1443 - - adu:107489031 311.612